| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is thiG
Identifier: 237814079
GI number: 237814079
Start: 3713680
End: 3714495
Strand: Reverse
Name: thiG
Synonym: GBP346_A3864
Alternate gene names: 237814079
Gene position: 3714495-3713680 (Counterclockwise)
Preceding gene: 237814080
Following gene: 237814078
Centisome position: 90.63
GC content: 69.49
Gene sequence:
>816_bases ATGACGCCTCTTTCTTCAGCCGATACGCTCACGCTGCACGGCCAAACCTTCGCGAGCCGCGTGCTGCTCGGCACGTCGCG CTATCCGTCGCTGCAATCGCTGTCCGATTCGATCGCGGCCGCGCGCCCGGGCATGGTGACGGTCGCGCTGCGTCGCCAGA TGAACGCCGGCGCGGCCGAGGCCGGTTTCTTCGAGCTGCTCAAGCGCCACGACGTGCCGCTCTTGCCGAACACGGCAGGC TGCCAGACGATCGCCGAGGCGGTGACGACCGCACAGATGGCGCGCGAGGTATTCGAGACCGACTGGATCAAGCTCGAGCT GATCGGCGACGACTACACGTTGCAGCCGGACCCGGTCGGCTTGATCGAAGCGGCGACGCTGCTCGTGAAGGACGGCTTCA AGGTGCTGCCGTATTGCACCGAGGATCTCGTGATCGCCCGGCGCCTGCTCGACGCCGGCTGCGAGGCGCTGATGCCGTGG GGCGCGCCGATCGGCACCGGCAAGGGCATCGTGAATCCGTACGGGCTGCGCGTGCTGCGCGAGCGGCTGCCGGACGTGCC GCTCATCGTTGACGCGGGGCTCGGCGTGCCGTCGCACGCGTGCCAGGTGATGGAGTGGGGCTTCGACGGCGTGTTGCTGA ACACGGCCGTGTCGCAGGCGACGCATCCGGAAATCATGGCGCGCGCGTTCGCACGGGGCGTCGAGGCGGGGCGCGCCGCG TATCTCGCGGGGCCGATGGATGCGCGCGAGAGCGCGCACGCGAGCACGCCCGTCGTCGGCATGCCGTTCTGGCACCAGGA CGGGAGCCACGCATGA
Upstream 100 bases:
>100_bases GCCGCGGGCGACAAGCTCGACATCGTGCATCCGGTCGCGGGCGGCTGACGCGCCGCCGCGCGCGCCTCGCCCCCGCTCCC CGTTCCCACAGGATCTTCCG
Downstream 100 bases:
>100_bases GCGCCGCGTTGCCCGACGCGTTCTGGCCGCCCGCCGACGAGCTTACCGAGGCCGCCGAGCGGATTCGCGCGACGCTCGGT GCGTGGCCGCGGCCGGCCGT
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MTPLSSADTLTLHGQTFASRVLLGTSRYPSLQSLSDSIAAARPGMVTVALRRQMNAGAAEAGFFELLKRHDVPLLPNTAG CQTIAEAVTTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAATLLVKDGFKVLPYCTEDLVIARRLLDAGCEALMPW GAPIGTGKGIVNPYGLRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPEIMARAFARGVEAGRAA YLAGPMDARESAHASTPVVGMPFWHQDGSHA
Sequences:
>Translated_271_residues MTPLSSADTLTLHGQTFASRVLLGTSRYPSLQSLSDSIAAARPGMVTVALRRQMNAGAAEAGFFELLKRHDVPLLPNTAG CQTIAEAVTTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAATLLVKDGFKVLPYCTEDLVIARRLLDAGCEALMPW GAPIGTGKGIVNPYGLRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPEIMARAFARGVEAGRAA YLAGPMDARESAHASTPVVGMPFWHQDGSHA >Mature_270_residues TPLSSADTLTLHGQTFASRVLLGTSRYPSLQSLSDSIAAARPGMVTVALRRQMNAGAAEAGFFELLKRHDVPLLPNTAGC QTIAEAVTTAQMAREVFETDWIKLELIGDDYTLQPDPVGLIEAATLLVKDGFKVLPYCTEDLVIARRLLDAGCEALMPWG APIGTGKGIVNPYGLRVLRERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPEIMARAFARGVEAGRAAY LAGPMDARESAHASTPVVGMPFWHQDGSHA
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=252, Percent_Identity=42.0634920634921, Blast_Score=190, Evalue=9e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_BURMA (Q62GC6)
Other databases:
- EMBL: CP000010 - RefSeq: YP_104248.1 - ProteinModelPortal: Q62GC6 - SMR: Q62GC6 - GeneID: 3091410 - GenomeReviews: CP000010_GR - KEGG: bma:BMA2728 - TIGR: BMA2728 - HOGENOM: HBG296821 - OMA: VAIRRTN - PhylomeDB: Q62GC6 - ProtClustDB: PRK00208 - BioCyc: BMAL243160:BMA_2728-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 28943; Mature: 28811
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: ACT_SITE 104-104 BINDING 165-165
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLSSADTLTLHGQTFASRVLLGTSRYPSLQSLSDSIAAARPGMVTVALRRQMNAGAAE CCCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCH AGFFELLKRHDVPLLPNTAGCQTIAEAVTTAQMAREVFETDWIKLELIGDDYTLQPDPVG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCH LIEAATLLVKDGFKVLPYCTEDLVIARRLLDAGCEALMPWGAPIGTGKGIVNPYGLRVLR HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH ERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPEIMARAFARGVEAGRAA HHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCEE YLAGPMDARESAHASTPVVGMPFWHQDGSHA EEECCCHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure TPLSSADTLTLHGQTFASRVLLGTSRYPSLQSLSDSIAAARPGMVTVALRRQMNAGAAE CCCCCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCH AGFFELLKRHDVPLLPNTAGCQTIAEAVTTAQMAREVFETDWIKLELIGDDYTLQPDPVG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCH LIEAATLLVKDGFKVLPYCTEDLVIARRLLDAGCEALMPWGAPIGTGKGIVNPYGLRVLR HHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH ERLPDVPLIVDAGLGVPSHACQVMEWGFDGVLLNTAVSQATHPEIMARAFARGVEAGRAA HHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHCCCEE YLAGPMDARESAHASTPVVGMPFWHQDGSHA EEECCCHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA