| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is hisD [H]
Identifier: 237814066
GI number: 237814066
Start: 3702620
End: 3703957
Strand: Reverse
Name: hisD [H]
Synonym: GBP346_A3851
Alternate gene names: 237814066
Gene position: 3703957-3702620 (Counterclockwise)
Preceding gene: 237814067
Following gene: 237814065
Centisome position: 90.37
GC content: 69.73
Gene sequence:
>1338_bases ATGGCTATCAAGATACGCAAACTCGATTCGGCAGGCGAAGGCTTCGCGGCCGAATTGCGCGCGGTGCTCGCGTTCGAGGC GAGCGAAGACGACGCGATCGAGCGCGCGGTCGCGCAGATTCTCGCCGACGTGAAGGCGCGCGGCGACGCCGCGGTGCTCG ACTACACGAATCGCTTCGACCGGCTGAACGCGGCGAGCGTCGCGGCGCTCGAGCTGCCGCAAAGCGAGCTGGAAGCGGCG CTCGAGGGCCTCGAGCCGAAGCGCCGCGCGGCGCTCGAAGCGGCGGCCGCGCGCGTGCGCGGCTACCACGAGAAGCAGAA GATCGAGTGCGGCAGCCATAGCTGGCAGTACACCGAGGCCGACGGCACCGTGCTCGGCCAGAAGGTGACGCCGCTCGACC GCGTCGGCCTGTACGTGCCGGGCGGCAAGGCCGCGTATCCGTCGTCGGTGCTGATGAACGCGATTCCGGCGCGCGTCGCG GGCGTCGGCGAGATCGTGATGGTCGTGCCGACGCCGGACGGCCTGAAGAACGATCTCGTGCTCGCCGCGGCGCTGTTGGG CGGCGTCGATCGCGTGCTCACGATCGGCGGCGCGCAGGCGGTGGCCGCGCTCGCGTACGGCACGCAAACGGTGCCCGCCG TCGACAAGATCTGCGGGCCGGGCAACGCGTACGTCGCGTCGGCCAAGCGCCGCGTGTTCGGCACGGTCGGCATCGACATG ATCGCCGGGCCGTCGGAGATCCTCGTGCTGTGCGACGGCACGACCGATCCGTCGTGGGTCGCGATGGACCTGTTCTCGCA GGCCGAGCACGACGAGCTCGCGCAATCGATCCTGCTGTGCCCGGACGAAGCGTTCATCGAGCGCGTCGAGAAGGCGATCG GCGAGCTGCTGCCGACGATGCCGCGCCAGGACGTGATCCGCGCGTCGCTCGAGGGGCGCGGCGCGCTCGTCAAGGTGCGC GACATGGCCGAGGCGTGCAGGATCGCGAACGACATCGCGCCCGAGCACCTGGAGATCTCCGCGCTCGAGCCGCACCAATG GGGCAAGCAGATCCGCCACGCGGGCGCGATCTTCCTCGGCCGCTACACGAGCGAGAGCCTGGGCGATTACTGCGCGGGCC CGAATCACGTGCTGCCGACGTCGCGCACCGCGCGCTTTTCGTCGCCGCTCGGCGTGTACGATTTCTTCAAGCGCTCGAGC CTGATCGAGGTGAGCGCCGAAGGCGCGCACACGCTCGGCGAGATCGCGTCCGAGCTCGCGTACGGCGAAGGTTTGCAGGC GCACGCGAAGAGCGCCGAGTACCGGATGAAAGGAGCGGGCGACCGCCAGAAAGGCTAA
Upstream 100 bases:
>100_bases CCGCGCTGAAGCCGTTCCTCGACGCGTTCGAACGCGCGTCGCTGGGGAGCGGCGCCTGACCCTCCGCGGCTCTCGGCGCA TTACCGGAACGGATGACAGC
Downstream 100 bases:
>100_bases GGGTAAGCCCAGCCGCGCCGGTTGCGCGAGACGAGACCAGCCCAAAAAGACGATAACCCGAGACCGCCCGGCGAGGCGTC TCGCGCGGCGCGACCGGTGC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAIKIRKLDSAGEGFAAELRAVLAFEASEDDAIERAVAQILADVKARGDAAVLDYTNRFDRLNAASVAALELPQSELEAA LEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGLKNDLVLAAALLGGVDRVLTIGGAQAVAALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPSWVAMDLFSQAEHDELAQSILLCPDEAFIERVEKAIGELLPTMPRQDVIRASLEGRGALVKVR DMAEACRIANDIAPEHLEISALEPHQWGKQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS LIEVSAEGAHTLGEIASELAYGEGLQAHAKSAEYRMKGAGDRQKG
Sequences:
>Translated_445_residues MAIKIRKLDSAGEGFAAELRAVLAFEASEDDAIERAVAQILADVKARGDAAVLDYTNRFDRLNAASVAALELPQSELEAA LEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVA GVGEIVMVVPTPDGLKNDLVLAAALLGGVDRVLTIGGAQAVAALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDM IAGPSEILVLCDGTTDPSWVAMDLFSQAEHDELAQSILLCPDEAFIERVEKAIGELLPTMPRQDVIRASLEGRGALVKVR DMAEACRIANDIAPEHLEISALEPHQWGKQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSS LIEVSAEGAHTLGEIASELAYGEGLQAHAKSAEYRMKGAGDRQKG >Mature_444_residues AIKIRKLDSAGEGFAAELRAVLAFEASEDDAIERAVAQILADVKARGDAAVLDYTNRFDRLNAASVAALELPQSELEAAL EGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEADGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAG VGEIVMVVPTPDGLKNDLVLAAALLGGVDRVLTIGGAQAVAALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDMI AGPSEILVLCDGTTDPSWVAMDLFSQAEHDELAQSILLCPDEAFIERVEKAIGELLPTMPRQDVIRASLEGRGALVKVRD MAEACRIANDIAPEHLEISALEPHQWGKQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSL IEVSAEGAHTLGEIASELAYGEGLQAHAKSAEYRMKGAGDRQKG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=415, Percent_Identity=41.2048192771084, Blast_Score=280, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6319819, Length=417, Percent_Identity=35.9712230215827, Blast_Score=237, Evalue=3e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47269; Mature: 47138
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKIRKLDSAGEGFAAELRAVLAFEASEDDAIERAVAQILADVKARGDAAVLDYTNRFD CEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHC RLNAASVAALELPQSELEAALEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEA CCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGLKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH LAAALLGGVDRVLTIGGAQAVAALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCHHHHEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPSWVAMDLFSQAEHDELAQSILLCPDEAFIERVEKAIGELLPTM ECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PRQDVIRASLEGRGALVKVRDMAEACRIANDIAPEHLEISALEPHQWGKQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSLIEVSAEGAHTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHH YGEGLQAHAKSAEYRMKGAGDRQKG HCCCHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure AIKIRKLDSAGEGFAAELRAVLAFEASEDDAIERAVAQILADVKARGDAAVLDYTNRFD EEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHC RLNAASVAALELPQSELEAALEGLEPKRRAALEAAAARVRGYHEKQKIECGSHSWQYTEA CCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEECC DGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGLKNDLV CCCEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH LAAALLGGVDRVLTIGGAQAVAALAYGTQTVPAVDKICGPGNAYVASAKRRVFGTVGIDM HHHHHHCCHHHHEEECCHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCHHE IAGPSEILVLCDGTTDPSWVAMDLFSQAEHDELAQSILLCPDEAFIERVEKAIGELLPTM ECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC PRQDVIRASLEGRGALVKVRDMAEACRIANDIAPEHLEISALEPHQWGKQIRHAGAIFLG CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCEEEE RYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFFKRSSLIEVSAEGAHTLGEIASELA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHH YGEGLQAHAKSAEYRMKGAGDRQKG HCCCHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA