| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is hisA [H]
Identifier: 237814061
GI number: 237814061
Start: 3698506
End: 3699261
Strand: Reverse
Name: hisA [H]
Synonym: GBP346_A3846
Alternate gene names: 237814061
Gene position: 3699261-3698506 (Counterclockwise)
Preceding gene: 237814062
Following gene: 237814060
Centisome position: 90.26
GC content: 64.02
Gene sequence:
>756_bases ATGCTGCTGATTCCGGCCATCGATCTTAAAGACGGTCAGTGTGTGCGCCTCAAACAAGGCGATATGGACCAGGCGACGAT TTTTTCCGAGGATCCTGCGGCGATGGCCCGTAAATGGGTCGATCTCGGGGCGCGGCGTCTGCATCTCGTCGATCTGAACG GCGCGTTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAGGCGATCCTCGGCGAGGTCGGCGACGAGATCCCCGTGCAG CTCGGCGGCGGCATCCGCAGCCTCGAGACAATCGAGAAATATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGC GGCGGTGAAGGACCCGGGCTTCCTGCAGGACGCGTGCAGCGCGTTCGCGGGCAACATCATCGTCGGCCTCGACGCGAAGG ACGGCAAGGTCGCCACCGACGGTTGGAGCAAGCTCACGGGCCACGAAGTGATCGATCTCGCGCGCAAGTTCGAGGACTAC GGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGTTGCAGGGCATCAACATCGAGGCGACCGTGAAGCT CGCGCAGGCGGTCGGCATTCCGGTGATCGCGAGCGGCGGCCTGTCGAACATCGTCGACATCGAGAAGCTCTGCGAGGTGG AAGACGAGGGCATCGAAGGCGTGATCTGCGGCCGGGCGATCTACTCGGGCGACCTCGATTTCGCCGCCGCGCAAAAGCGC GCGGACGAACTGAACGGCGAGCTCGACGACGCCTGA
Upstream 100 bases:
>100_bases CAGAAAGAGTTGTACTAAACTAGCGAGACGGCATCGCGCCGGATGGGCCGGCGCGCGTCTTTTCGATCTCTTCATTTTTC CCTGACAACACCCGATTGCT
Downstream 100 bases:
>100_bases CGCGCCGTCTCGGCACGACGCCTTTTCGCCAAGCCGTCCGCCTCGCGCGGGCGGCATTACCCGCGGCATGCCGCGCAACA TCATGGCTCTAGCTAAACGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILGEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKDPGFLQDACSAFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLARKFEDY GVESIVYTDIGRDGMLQGINIEATVKLAQAVGIPVIASGGLSNIVDIEKLCEVEDEGIEGVICGRAIYSGDLDFAAAQKR ADELNGELDDA
Sequences:
>Translated_251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILGEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKDPGFLQDACSAFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLARKFEDY GVESIVYTDIGRDGMLQGINIEATVKLAQAVGIPVIASGGLSNIVDIEKLCEVEDEGIEGVICGRAIYSGDLDFAAAQKR ADELNGELDDA >Mature_251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILGEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKDPGFLQDACSAFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLARKFEDY GVESIVYTDIGRDGMLQGINIEATVKLAQAVGIPVIASGGLSNIVDIEKLCEVEDEGIEGVICGRAIYSGDLDFAAAQKR ADELNGELDDA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=32.5102880658436, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788336, Length=209, Percent_Identity=27.7511961722488, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26589; Mature: 26589
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNLEAIEAILGEVGDEIPVQLGGGIRSLETIEKYLDAGLSYVIIGTAAVKDPGFLQDACS CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHH AFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLARKFEDYGVESIVYTDIGRDGMLQGIN HHCCCEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IEATVKLAQAVGIPVIASGGLSNIVDIEKLCEVEDEGIEGVICGRAIYSGDLDFAAAQKR HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCCHHHHHHH ADELNGELDDA HHHCCCCCCCC >Mature Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNLEAIEAILGEVGDEIPVQLGGGIRSLETIEKYLDAGLSYVIIGTAAVKDPGFLQDACS CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHH AFAGNIIVGLDAKDGKVATDGWSKLTGHEVIDLARKFEDYGVESIVYTDIGRDGMLQGIN HHCCCEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IEATVKLAQAVGIPVIASGGLSNIVDIEKLCEVEDEGIEGVICGRAIYSGDLDFAAAQKR HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCCHHHHHHH ADELNGELDDA HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA