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The map label for this gene is sspB [H]

Identifier: 237814045

GI number: 237814045

Start: 3687731

End: 3688240

Strand: Reverse

Name: sspB [H]

Synonym: GBP346_A3830

Alternate gene names: 237814045

Gene position: 3688240-3687731 (Counterclockwise)

Preceding gene: 237814046

Following gene: 237814043

Centisome position: 89.99

GC content: 64.12

Gene sequence:

>510_bases
ATGCAAGAGATTTCCACGAAGCCGTATTTGCTGCGCGCGCTGTACGAATGGTGCACGGATAACGGATACACACCCCATAT
CGCGGTGCGGGTCGACAAGTCGACGCGCGTGCCGCGCCAGTTCGTGCGCGATGGGGAGATCGTGTTGAACATCAGCTTCG
AGGCGACGAGCCAGCTGCAGATGGGCAACGAATGGATCGAGTTCACCGCGCGGTTTTCGGGCAAGGCGCACAAGCTCGAG
GTGCCGGTTGCGAACGTGCTTGCGATCTACGCACGGGAGAACGGCCAGGGGATGGCGTTTCAGGTCGACGTTGCCGCGGA
GATGGGCGAGGCTGACGGTAGCGACGCGCTTGCTGTGGCAGAGGAAGGGGACGATGCGGGCGCGCGCCACGCTTCAGCCG
AGGCGGCGCCCGAGCCCGGTGACGCTGCGGAGGAGTTGCCGAAGTCCGATGGCGATGGCGACGGTGATGGGGCGAAAGGC
AGCCGGCCTCGCCTCAAGATCGTGAAATGA

Upstream 100 bases:

>100_bases
GACGCCGTCCGAAAAGGTCATGCGTCGTTAAGCTGTATGTGACTGGGGAGCGGATGCGGCGGCATTGCGCCGCCGCGTCC
GTTTCCGTTCGAGGATGGCG

Downstream 100 bases:

>100_bases
GGTAGAATTTCCGGCTCAACGCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGT
CCTGCAGCCGGCACCAATCA

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLE
VPVANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASAEAAPEPGDAAEELPKSDGDGDGDGAKG
SRPRLKIVK

Sequences:

>Translated_169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLE
VPVANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASAEAAPEPGDAAEELPKSDGDGDGDGAKG
SRPRLKIVK
>Mature_169_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKLE
VPVANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVAEEGDDAGARHASAEAAPEPGDAAEELPKSDGDGDGDGAKG
SRPRLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=105, Percent_Identity=48.5714285714286, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18206; Mature: 18206

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEE
EEGDDAGARHASAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPRLKIVK
ECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDKSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKLEVPVANVLAIYARENGQGMAFQVDVAAEMGEADGSDALAVA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEE
EEGDDAGARHASAEAAPEPGDAAEELPKSDGDGDGDGAKGSRPRLKIVK
ECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]