| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814043
Identifier: 237814043
GI number: 237814043
Start: 3687012
End: 3687509
Strand: Reverse
Name: 237814043
Synonym: GBP346_A3827
Alternate gene names: NA
Gene position: 3687509-3687012 (Counterclockwise)
Preceding gene: 237814045
Following gene: 237814042
Centisome position: 89.97
GC content: 65.66
Gene sequence:
>498_bases ATGCCGGGGCCGCTATGCCCCGCCAAGCGCTGTCCAGCCTCCAATCCTTCGTCAATCGTTTTGTGCGTCACGCCGCGCGC GCGCAAGTCGCGGAACTGGAATTTCGCCTTCTCGATGCCAGCCTTTTCGCGCGCTTTGTCGAACCGGGATCGTAGCTGGC CCTTCGTGAGAGGATACCAGCTCGTGCGCAAGTTCTTCCCGGCCGCCGTCGCGCTGAACTACTCGCCCGAGGTGAAAACC CGCCTCGTGCTCAAGGGCCAGTCCGTCGTCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGCGGCGGC GTTCATGGCGATCAAACAGACGATGACGGCGAGCGGCCGTCAGGCGACCTACACCGCCGGCCGCACCGACGAGACGGGCC ACGCCGACCTGGCGTGGGCGTGCCTGCACGCGATCGACCGCGAGCCGCTCGCCGGCGGCGGCATTCATTCATCTTCATTC ACGGAGTTTTACGCATGA
Upstream 100 bases:
>100_bases TCGCGTAACCCCTTGGCGTTTCCAAAACGCCTCTCACGTTTCCAAAACTCATCAGCGCGACGGTTTAACAGGGCGTGTGC CCCGCACGTAGCGCGCCGTC
Downstream 100 bases:
>100_bases GCAAGCGCCGATCGCGCGCGCCGCGCACGTTCGCGGCCGCGCCCAATCCGAGCGCCGGCAGCGCCGCGCCGGCGCGTGCC GAGGTCTTCACGTTCGACGA
Product: terminase, large subunit
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Fels-2 Prophage Protein; Prophage Large Terminase Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Terminase Related Protein; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPGPLCPAKRCPASNPSSIVLCVTPRARKSRNWNFAFSMPAFSRALSNRDRSWPFVRGYQLVRKFFPAAVALNYSPEVKT RLVLKGQSVVRNGRLQFDAGWTDLAAAFMAIKQTMTASGRQATYTAGRTDETGHADLAWACLHAIDREPLAGGGIHSSSF TEFYA
Sequences:
>Translated_165_residues MPGPLCPAKRCPASNPSSIVLCVTPRARKSRNWNFAFSMPAFSRALSNRDRSWPFVRGYQLVRKFFPAAVALNYSPEVKT RLVLKGQSVVRNGRLQFDAGWTDLAAAFMAIKQTMTASGRQATYTAGRTDETGHADLAWACLHAIDREPLAGGGIHSSSF TEFYA >Mature_164_residues PGPLCPAKRCPASNPSSIVLCVTPRARKSRNWNFAFSMPAFSRALSNRDRSWPFVRGYQLVRKFFPAAVALNYSPEVKTR LVLKGQSVVRNGRLQFDAGWTDLAAAFMAIKQTMTASGRQATYTAGRTDETGHADLAWACLHAIDREPLAGGGIHSSSFT EFYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18144; Mature: 18013
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPLCPAKRCPASNPSSIVLCVTPRARKSRNWNFAFSMPAFSRALSNRDRSWPFVRGYQ CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHH LVRKFFPAAVALNYSPEVKTRLVLKGQSVVRNGRLQFDAGWTDLAAAFMAIKQTMTASGR HHHHHCCHHEEECCCCCCEEEEEECCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCC QATYTAGRTDETGHADLAWACLHAIDREPLAGGGIHSSSFTEFYA EEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure PGPLCPAKRCPASNPSSIVLCVTPRARKSRNWNFAFSMPAFSRALSNRDRSWPFVRGYQ CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHHH LVRKFFPAAVALNYSPEVKTRLVLKGQSVVRNGRLQFDAGWTDLAAAFMAIKQTMTASGR HHHHHCCHHEEECCCCCCEEEEEECCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCC QATYTAGRTDETGHADLAWACLHAIDREPLAGGGIHSSSFTEFYA EEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA