| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814028
Identifier: 237814028
GI number: 237814028
Start: 3675986
End: 3676315
Strand: Reverse
Name: 237814028
Synonym: GBP346_A3812
Alternate gene names: NA
Gene position: 3676315-3675986 (Counterclockwise)
Preceding gene: 237814033
Following gene: 237814027
Centisome position: 89.7
GC content: 51.82
Gene sequence:
>330_bases ATGCGGATTCATCGATTTTTCAGGGCGCGTCCGCCCCTTGCTCCCTGTCAAAACTATCAGTTACTTTGCCGATTTGGCGG CGAAAAAAAGGTCCGCCACTTCAAATGCCGGGTGGCTGCCGTCAATGCTGCATTATTCGGAAAAATTTTCCATGAATCGG GCGAAATCGAATTCCGTTGCGGCAATAATTGCAATGGGAGCGGTACACGGCGATCCCCGGAGTTTGCGTGGCGCGTCAGG CGGCACGCCGAACTGCTTTTAAAACGGCCGCTCTTCACGCGAAGATTGAATTATGAAAAATTGATCGGTACTATACCCGC GCGCTTGTAG
Upstream 100 bases:
>100_bases TTTGCAGCGCGGCGCTGCCCGCCGAACCGAGGAGCGGCACGGCGGCCGCGCAGCCGCCGAGCAGAATGCAGGCGGCGAGC GGCAGCGCGTAACGAGTCAC
Downstream 100 bases:
>100_bases CAAAGCAAAATCACGAATTCTCAACGATTTAAAACGCCCGCGCCGGGGATATAAACGATGAAAGACCGTCTCTTCGCAAA ACTTTCTGGGGTAGTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MRIHRFFRARPPLAPCQNYQLLCRFGGEKKVRHFKCRVAAVNAALFGKIFHESGEIEFRCGNNCNGSGTRRSPEFAWRVR RHAELLLKRPLFTRRLNYEKLIGTIPARL
Sequences:
>Translated_109_residues MRIHRFFRARPPLAPCQNYQLLCRFGGEKKVRHFKCRVAAVNAALFGKIFHESGEIEFRCGNNCNGSGTRRSPEFAWRVR RHAELLLKRPLFTRRLNYEKLIGTIPARL >Mature_109_residues MRIHRFFRARPPLAPCQNYQLLCRFGGEKKVRHFKCRVAAVNAALFGKIFHESGEIEFRCGNNCNGSGTRRSPEFAWRVR RHAELLLKRPLFTRRLNYEKLIGTIPARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12770; Mature: 12770
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIHRFFRARPPLAPCQNYQLLCRFGGEKKVRHFKCRVAAVNAALFGKIFHESGEIEFRC CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GNNCNGSGTRRSPEFAWRVRRHAELLLKRPLFTRRLNYEKLIGTIPARL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MRIHRFFRARPPLAPCQNYQLLCRFGGEKKVRHFKCRVAAVNAALFGKIFHESGEIEFRC CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GNNCNGSGTRRSPEFAWRVRRHAELLLKRPLFTRRLNYEKLIGTIPARL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA