| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814033
Identifier: 237814033
GI number: 237814033
Start: 3680712
End: 3681128
Strand: Reverse
Name: 237814033
Synonym: GBP346_A3817
Alternate gene names: NA
Gene position: 3681128-3680712 (Counterclockwise)
Preceding gene: 237814034
Following gene: 237814028
Centisome position: 89.81
GC content: 68.59
Gene sequence:
>417_bases GTGCAGGCGGCCGGCTTGATCCTGCGCGGCGTCGCGGTATGGGACAAGACGCTCGGCCGCATGCGGCTGCGGCGTGGCGG CTTCGCGCAGCAGGCGGAATTCGTCGTATGGGCGAGCCGCGGCGCGATGCGCGGCTGCGACGTGTATCTGCCGGGCGTGT TCCCGTGCCGCTTGCCGTTGCCGAAGCAACACGTGACCGAGAAGCCGCTCGACATAGCGCGCGAGGTCGTGCGGCTCATG CCGGCCGGCGTCGTCGTGTGCGATCTGTTCGCCGGTTCCGGCACGTTTCTCGCCGCGGCGCGCGAGGCGGGCTTGCACTG GGTCGGAAGCGAGTCGAATCAGGCGTATCACGCGATCTCATCGGCCCGGCTCGACGCTACGGCGGATAACTCAGGGGTTC AGCCGTGCAGCATTTAA
Upstream 100 bases:
>100_bases TGTCACGCCTGGCTGAGCGAATGCCGCCGCGCGTTGAAGCCGGGCGGGCTGCTCGTGAGCTTCATCGACTGGCGCCAGCT CCCCGACGCTGACCGATGTC
Downstream 100 bases:
>100_bases ATGAAACGATTCGGTGGACCATTAAATAATTTTGGTCAACCTTAATTTAAATGGGGGAGGCGAAATATTGATTCCCGTCT CCTATAATAATTCCGGTGCC
Product: DNA (cytosine-5-)-methyltransferase
Products: NA
Alternate protein names: DNA Methylase; DNA Methylase N-4/N-6 Domain Protein; Prophage DNA Adenine Methylase; DNA Methylase N-4/N-6 Domain-Containing Protein; Prophage; Adenine-Specific Methyltransferase; Adenine Specific DNA Methyltransferase; DNA-Methyltransferase; Site-Specific DNA Methyltransferase
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MQAAGLILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPLPKQHVTEKPLDIAREVVRLM PAGVVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAISSARLDATADNSGVQPCSI
Sequences:
>Translated_138_residues MQAAGLILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPLPKQHVTEKPLDIAREVVRLM PAGVVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAISSARLDATADNSGVQPCSI >Mature_138_residues MQAAGLILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPLPKQHVTEKPLDIAREVVRLM PAGVVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAISSARLDATADNSGVQPCSI
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14821; Mature: 14821
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAAGLILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC PKQHVTEKPLDIAREVVRLMPAGVVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAIS CHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHCCEEEECCCCCCHHHHHH SARLDATADNSGVQPCSI HHCCCCCCCCCCCCCCCC >Mature Secondary Structure MQAAGLILRGVAVWDKTLGRMRLRRGGFAQQAEFVVWASRGAMRGCDVYLPGVFPCRLPL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCC PKQHVTEKPLDIAREVVRLMPAGVVVCDLFAGSGTFLAAAREAGLHWVGSESNQAYHAIS CHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEHHHCCEEEECCCCCCHHHHHH SARLDATADNSGVQPCSI HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA