Click here to switch to the map view.

The map label for this gene is ycdI [C]

Identifier: 237813989

GI number: 237813989

Start: 3637933

End: 3638538

Strand: Reverse

Name: ycdI [C]

Synonym: GBP346_A3773

Alternate gene names: 237813989

Gene position: 3638538-3637933 (Counterclockwise)

Preceding gene: 237813991

Following gene: 237813988

Centisome position: 88.78

GC content: 67.82

Gene sequence:

>606_bases
ATGTCCGTCAAACCCGCTCCCACTTCCGTTTCGATTCACGAACTGATCGCCGGCCGCTGGAGCCCGCGCGCGTATTCGAG
CGAGCCCGTCAGCGCCGAGCATCTGCACGCCGTGCTCGAAGCGGCGCGCTGGGCGCCGTCCGCGTACAACGCGCAACCGT
GGCGCTTCATCGTATTCGACCGCAGCAAGGACGAGGTCGCGTTCAAGCGCGCATTCTCGACGCTCGTGCCGTTCAACCAG
GGCTGGAACGCACCGGCGCCCGTGCTGATCGCGGTCACCGCGCACACGCTCACGTCGAAGGGCGAGCCGAGTCCGACGGC
GCTCTACGACGCCGGCGCGGCCGCGATGTCGCTCGTGTTGCAAGCGCACGCGCTCGGTCTCGCCGCGCACCAGATGAGCG
GTTTCGACGTGAAGGCGTTCCGCGCCGCATTCGCGATTCCCGCCGACGTCGAGCCGCTCGCGATCATCTCGATCGGCCAT
TACGGCGATGCGGACAAACTCGATCCGGTGCTGCGCGAGCGCGAACGCGCGGTGCGCACGCGCCATCCAATCGGTGAGGT
CGTCTACGCGCACGCGTGGCAGAAGCCGTTCCCGTCGGCAGATTGA

Upstream 100 bases:

>100_bases
CATTCGCGCGCACGCTCCGGCAAGTTCGTCGACAAGCGGTTATGCTGGCGTTTCTTTTTCCGGGCGACCGAGCCCTTTTT
AAAGATAGGTGAGGAAACGC

Downstream 100 bases:

>100_bases
CGTGACGCAGCGTGCGGCCCGCACGCGAGGCGCCACGGTAGGGCCGCGCGCGCCGGGGCCGCCGGTCGGGCGGTCGCGGG
CGGGGCGCCCCTTGCTGGCC

Product: nitroreductase family protein

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NAD(P)H-Flavin Oxidoreductase; Bacterioferritin Comigratory Protein/NADH Dehydrogenase; Oxidoreductase Protein; Oxygen-Insensitive Nitroreductase; NADH Dehydrogenase/NAD(P)H Nitroreductase

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQ
GWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGH
YGDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD

Sequences:

>Translated_201_residues
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQ
GWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGH
YGDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD
>Mature_200_residues
SVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFDRSKDEVAFKRAFSTLVPFNQG
WNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVLQAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGHY
GDADKLDPVLRERERAVRTRHPIGEVVYAHAWQKPFPSAD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 21812; Mature: 21681

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFD
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
RSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGHYGDADKLDPVLRERERAVRT
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
RHPIGEVVYAHAWQKPFPSAD
HCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVKPAPTSVSIHELIAGRWSPRAYSSEPVSAEHLHAVLEAARWAPSAYNAQPWRFIVFD
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
RSKDEVAFKRAFSTLVPFNQGWNAPAPVLIAVTAHTLTSKGEPSPTALYDAGAAAMSLVL
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHH
QAHALGLAAHQMSGFDVKAFRAAFAIPADVEPLAIISIGHYGDADKLDPVLRERERAVRT
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
RHPIGEVVYAHAWQKPFPSAD
HCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA