| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813913
Identifier: 237813913
GI number: 237813913
Start: 3560450
End: 3561094
Strand: Reverse
Name: 237813913
Synonym: GBP346_A3692
Alternate gene names: NA
Gene position: 3561094-3560450 (Counterclockwise)
Preceding gene: 237813914
Following gene: 237813912
Centisome position: 86.89
GC content: 68.37
Gene sequence:
>645_bases GTGACGGATGAAACGGCTGACGACAGGCCGCGTCGCTTCGCGACGCCGGGCCGGGCGAGTCGCCCGCTTCGCATGCGCGA GGCCGGGTTGGGCCGCGTCGTCTGTCGCGAACGACCGTATCGCTATGAAGGACCGGGCATGATTCAAGTGGGCGACACGC TGCCCGACGCGCAGCTCTTCGAGTACCTCGACGATGCGCGCGCGGGCTGCACGCCGGGGCCGAACGCCTTTGGCGTGCGC GAGCAGACGGCGGGAAAGCGCGTGGTGATCTTCGGATTGCCGGGCGCGTTCACGCCGACTTGCTCGGCGCAGCATGTGCC GGGCTACGTCGCGCATGCCGAGCCGTTGCGCTCGGCGGGCATCGACGAGATCTGGTGCGTTGCCGTCAACGACGCATTCG TGATGGGCGCTTGGGGACGCGATCTGCACACCGCGGGCAAGGTGCGCATGATGGCGGACGGCAGCGCGGCTTTCACTCAT GCGCTGGGACTGACGCAGGACCTGTCCGCGCGTGGCATGGGGATTCGCTCCCGACGCTACGCGATGGTGGTCGACGACGG CGTGGTCAAGACGCTGTTCGTCGAAGCGCCGGGCAAGTTCGAAGTGAGCGATGCGGCCAGCGTGCTGGCCGGTTTGACGC GCTGA
Upstream 100 bases:
>100_bases AGGGTGTCGACACGTACGACATTCCGGCATTCCTGCGCAAGCAGGCCGACTGACGCGCGCGAGGCATCGCGCCGCGCGGT TTCGCGCGGCACGAGCCGAC
Downstream 100 bases:
>100_bases ACGACGCGTGCGACGTTGCCTTTCGACAACGCCGCGGCGCGCCCGACACGCGGTTGTAACACGGGCTGACGACCGGGAAC GCCTCCGTTCCGGGCGTCGG
Product: AhpC/TSA family protein
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTDETADDRPRRFATPGRASRPLRMREAGLGRVVCRERPYRYEGPGMIQVGDTLPDAQLFEYLDDARAGCTPGPNAFGVR EQTAGKRVVIFGLPGAFTPTCSAQHVPGYVAHAEPLRSAGIDEIWCVAVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTH ALGLTQDLSARGMGIRSRRYAMVVDDGVVKTLFVEAPGKFEVSDAASVLAGLTR
Sequences:
>Translated_214_residues MTDETADDRPRRFATPGRASRPLRMREAGLGRVVCRERPYRYEGPGMIQVGDTLPDAQLFEYLDDARAGCTPGPNAFGVR EQTAGKRVVIFGLPGAFTPTCSAQHVPGYVAHAEPLRSAGIDEIWCVAVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTH ALGLTQDLSARGMGIRSRRYAMVVDDGVVKTLFVEAPGKFEVSDAASVLAGLTR >Mature_213_residues TDETADDRPRRFATPGRASRPLRMREAGLGRVVCRERPYRYEGPGMIQVGDTLPDAQLFEYLDDARAGCTPGPNAFGVRE QTAGKRVVIFGLPGAFTPTCSAQHVPGYVAHAEPLRSAGIDEIWCVAVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHA LGLTQDLSARGMGIRSRRYAMVVDDGVVKTLFVEAPGKFEVSDAASVLAGLTR
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=153, Percent_Identity=43.7908496732026, Blast_Score=121, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323138, Length=136, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI78706776, Length=176, Percent_Identity=45.4545454545455, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI78709078, Length=176, Percent_Identity=45.4545454545455, Blast_Score=149, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 23044; Mature: 22912
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDETADDRPRRFATPGRASRPLRMREAGLGRVVCRERPYRYEGPGMIQVGDTLPDAQLF CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEECCCCEEEECCCCCHHHHH EYLDDARAGCTPGPNAFGVREQTAGKRVVIFGLPGAFTPTCSAQHVPGYVAHAEPLRSAG HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCHHHHCC IDEIWCVAVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSRRY CCEEEEEEECCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHCCCCCCCCEE AMVVDDGVVKTLFVEAPGKFEVSDAASVLAGLTR EEEECCCCEEEEEEECCCCEEHHHHHHHHHHCCC >Mature Secondary Structure TDETADDRPRRFATPGRASRPLRMREAGLGRVVCRERPYRYEGPGMIQVGDTLPDAQLF CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEECCCCEEEECCCCCHHHHH EYLDDARAGCTPGPNAFGVREQTAGKRVVIFGLPGAFTPTCSAQHVPGYVAHAEPLRSAG HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCHHHHCC IDEIWCVAVNDAFVMGAWGRDLHTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSRRY CCEEEEEEECCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHCCCCCCCCEE AMVVDDGVVKTLFVEAPGKFEVSDAASVLAGLTR EEEECCCCEEEEEEECCCCEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]