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The map label for this gene is alc [H]

Identifier: 237813824

GI number: 237813824

Start: 3478667

End: 3479740

Strand: Reverse

Name: alc [H]

Synonym: GBP346_A3602

Alternate gene names: 237813824

Gene position: 3479740-3478667 (Counterclockwise)

Preceding gene: 237813825

Following gene: 237813823

Centisome position: 84.9

GC content: 69.18

Gene sequence:

>1074_bases
ATGGCCGCCGATTTTTCCGCCGGTTTTCCGCTTTCGGACACACATTCAATAACAGGAGACGACATGGCCGCCCCGATTCT
CGATCCGAACGCACCCGCGTTCACGCGCCGCTACATGAATCTCGCCGACCCGCGCCTCGGTGCGAAGGCGCTCTTCGCGA
GCGACGAATTCTTCGCGCCGAAGGAGCGGATGCTCGATCCCGAGCCCGCCGTGTTCATTCCCGGCAAGTACGACGACCAC
GGCAAATGGATGGACGGCTGGGAGACGCGCCGCAAGCGCACGACGGGGCACGACTTCTGCGTCGTGCGGCTCGCGCGGCC
GGGCGTGGTGTACGGCGTCGATCTCGACACGAGCCACTTCACCGGCAATTTCCCGCCCGCCGCGTCGATCGACGCATGCG
TGTCGGACGCCGACACGCCGCCCGACGACGCCGTCTGGGAAACGCTCGTGCCGGCGACGACGCTCGCCGGCAATCAGCAT
CACTACGTCGACGTGAGCAATCCTCGCGCCTATACGCACCTGCGCGTGAACCTGTATCCGGACGGCGGGCTCGCGCGGCT
GCGCGTGTACGGCCAGCCGCAGCGCGACTGGAGCCGCGCGGCGAGCGGCGAGCTCGTCGATCTGGCCGCGATCGAGAACG
GCGCGTATCTCGTCGCCGCGAACAACGAGCACTTCGGCCCCGCGTCGCGGATGCTGATGCCCGGGCGCGGCGCGAACATG
GGCGACGGCTGGGAGACGCGCCGCCGCCGCGAGCCCGGCAACGACTGGGCGATCGTCGCGCTCGCGCGGCCCGGCGTGAT
TCGTAGGGTCGAAGTCGATACCGCGCACTTCAAGGGCAATTTCCCGGACCGCTGCTCGCTGCAGGCGGCGCGCGTCGCGG
GCGGCACGGACGCGTCGCTCGTCACGCAGGCGATGTTCTGGCCGATGCTGCTCGGCGAGCAGCCGCTCGGGATGGATAGC
GTGCATACGTTCGAGACGCAGCTCGCGGCGCTCGGCCCCGTCTCGCACGTGCGGCTGAACATCCATCCGGACGGCGGCGT
GTCGCGCCTGCGCCTCTGGGGCGAGCTCGCATAA

Upstream 100 bases:

>100_bases
CGGACGGCGGCGCGCACGCGCTCTGACGCGGCCCCGCCCGGCATCATCGCGCGGCCGGCGCTCAGCTTCGCGCCGGCGCT
TCGTTTTTCAGGCTGGCGCA

Downstream 100 bases:

>100_bases
ACGGAGGCCGCCCATGCAGACGCTGCACACCCTGCGCCTCGAGCGCCTGACGCGGGAAGCGTTCGCGCCGTTCGGCGACG
TGATCGAGCTGGCGGGCGCG

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 2 [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAADFSAGFPLSDTHSITGDDMAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDH
GKWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQH
HYVDVSNPRAYTHLRVNLYPDGGLARLRVYGQPQRDWSRAASGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANM
GDGWETRRRREPGNDWAIVALARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDS
VHTFETQLAALGPVSHVRLNIHPDGGVSRLRLWGELA

Sequences:

>Translated_357_residues
MAADFSAGFPLSDTHSITGDDMAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDH
GKWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQH
HYVDVSNPRAYTHLRVNLYPDGGLARLRVYGQPQRDWSRAASGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANM
GDGWETRRRREPGNDWAIVALARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDS
VHTFETQLAALGPVSHVRLNIHPDGGVSRLRLWGELA
>Mature_356_residues
AADFSAGFPLSDTHSITGDDMAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAPKERMLDPEPAVFIPGKYDDHG
KWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHFTGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHH
YVDVSNPRAYTHLRVNLYPDGGLARLRVYGQPQRDWSRAASGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANMG
DGWETRRRREPGNDWAIVALARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASLVTQAMFWPMLLGEQPLGMDSV
HTFETQLAALGPVSHVRLNIHPDGGVSRLRLWGELA

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=365, Percent_Identity=38.6301369863014, Blast_Score=249, Evalue=4e-66,
Organism=Saccharomyces cerevisiae, GI6322220, Length=330, Percent_Identity=34.5454545454545, Blast_Score=213, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 39026; Mature: 38895

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADFSAGFPLSDTHSITGDDMAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCC
KERMLDPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHF
HHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCC
TGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYP
CCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCCCEEEEEEEEEEC
DGGLARLRVYGQPQRDWSRAASGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANM
CCCEEEEEEECCCCHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCHHCEEECCCCCCC
GDGWETRRRREPGNDWAIVALARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASL
CCCHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCEECCCCCCCCCCEEEEECCCCCHHH
VTQAMFWPMLLGEQPLGMDSVHTFETQLAALGPVSHVRLNIHPDGGVSRLRLWGELA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
AADFSAGFPLSDTHSITGDDMAAPILDPNAPAFTRRYMNLADPRLGAKALFASDEFFAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCC
KERMLDPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCVVRLARPGVVYGVDLDTSHF
HHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCC
TGNFPPAASIDACVSDADTPPDDAVWETLVPATTLAGNQHHYVDVSNPRAYTHLRVNLYP
CCCCCCCCCHHHHHCCCCCCCCHHHHHHHCCHHHCCCCCEEEEECCCCCEEEEEEEEEEC
DGGLARLRVYGQPQRDWSRAASGELVDLAAIENGAYLVAANNEHFGPASRMLMPGRGANM
CCCEEEEEEECCCCHHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCHHCEEECCCCCCC
GDGWETRRRREPGNDWAIVALARPGVIRRVEVDTAHFKGNFPDRCSLQAARVAGGTDASL
CCCHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCEECCCCCCCCCCEEEEECCCCCHHH
VTQAMFWPMLLGEQPLGMDSVHTFETQLAALGPVSHVRLNIHPDGGVSRLRLWGELA
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA