| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gntP [H]
Identifier: 237813806
GI number: 237813806
Start: 3462231
End: 3463592
Strand: Reverse
Name: gntP [H]
Synonym: GBP346_A3584
Alternate gene names: 237813806
Gene position: 3463592-3462231 (Counterclockwise)
Preceding gene: 237813808
Following gene: 237813805
Centisome position: 84.51
GC content: 65.93
Gene sequence:
>1362_bases ATGGGGGCTGTCCAAGGCAGCATGCTGCTGATTTACACCGTGATCGCGATCGCGGTGCTGATCCTGATGATCGCGCGCTA CAAGGTGTATCCGTTCCTTGTGCTGATCATCGTGTCGCTCGGTCTCGGCCTCGCGGTCGGCATGCCGATGGACAAGATCG TGAAATCGTTCGAGGGGGGCACGGGCGGCACGCTCGGCCACATCGCGATCGTCGTCGGCCTCGGCACGATGCTCGGCAAG ATGATGGCCGAATCGGGCGGCGCCGAGCGGATCGCGACCACGCTGATCGACTGGTTCGGCGAGAAGAACATCCACTGGGC GATGATGTTCGTCGCGATCATCGTCGGGTTGCCGGTGTTCTTCGAAGTCGGCTTCGTGCTGCTGATCCCGATCGCGTTCA ACGTCGCGAAACGCACCGGCAAGTCGCTGCTCGTCGTCGGGCTGCCGATGGTGGCGGGCCTGTCGGTCGTGCACGGGCTG ATTCCGCCGCACCCGGCGGCGCTCCTCGCCGTTCAGCAATACGGCGCCGACATCGGCAAGACGATCGCGTACGGCCTCAT CGTCGGCGTGCCGACCGCGATCGTCGCGGGGCCGCTGTTCGCGCTCACGATCTCGAAGTTCGTGAAGCTGCCGGAGCACA ATCCGCTCGCGTCGCAGTTCGTCGAGACGCGCGCGGCGGGCGAGACGCGCGAGCTGCCGAGCTTCGGCATCACGCTGTTC ACGATCCTGCTGCCCGTCGTGCTGATGCTCGTCGGCAGCTGGGCCGATCTCGTGTTCGCGCCGAAATCGCTGCCGAACAG CCTGCTGCGCTTCGCCGGCAATTCGGATGTCGCGCTCCTGATCGCCGTGCTCGTGAGCTTCTTCACGTTCGGCAAGCTGC AGGGCTTCAATCGCGAGCAGATCCAGAAGTTCTGCGGCGATTGCCTCGCGCCGATCGCGGGCATCACGCTGATCGTCGGC GCGGGCGGCGGCTTCGGCGGTATTCTGCGCGACAGCGGCATCTCGCAGCAGATCGTCGCGACCGCGACGCACGCGCATCT GTCGCCGCTGCTGCTCGGCTGGTTCGTCGCGGCGCTGATCCGTCTCGCGACGGGTTCGGCCACCGTCGCGATGACGACCG CCTGCGGGATCGTCGCGCCGATCGCCGCGGCCTCGGGCGTCACGGTGCGCCCGGAGCTGCTCGTGCTCGCGACGGGCTCG GGCTCGCTCATCTTCTCGCACGTGAACGACGGCGGCTTCTGGCTGATCAAGGAATATTTCGGGATGACCGTGGGGCAGAC GTTCAAGACGTGGACGCTGCTCGAAACGATCATCTCGGTGCTCGGTCTCACCTTCACGCTGGCGCTGAGCGCGGTTCTGT AA
Upstream 100 bases:
>100_bases AGCGTCCCGACGGGCGGCGAACCGCCTCGTTTCGGAGGCCTGCATAGCCGGACGGCGGCCCGCCGCGTCCGGCCCGATCT ATCCCAAGGAGGAGTGCTAC
Downstream 100 bases:
>100_bases CAAGGGGTAGTCAATGATTCTGATCGCAATGGGCGTGTCGGGCGCGGGCAAGTCGCGGATCGGCGAAATGCTCGCGCAAC GCCTGTCGTGCAGCTATACC
Product: transporter, gluconate:H+ symporter (GntP) family
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MGAVQGSMLLIYTVIAIAVLILMIARYKVYPFLVLIIVSLGLGLAVGMPMDKIVKSFEGGTGGTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGL IPPHPAALLAVQQYGADIGKTIAYGLIVGVPTAIVAGPLFALTISKFVKLPEHNPLASQFVETRAAGETRELPSFGITLF TILLPVVLMLVGSWADLVFAPKSLPNSLLRFAGNSDVALLIAVLVSFFTFGKLQGFNREQIQKFCGDCLAPIAGITLIVG AGGGFGGILRDSGISQQIVATATHAHLSPLLLGWFVAALIRLATGSATVAMTTACGIVAPIAAASGVTVRPELLVLATGS GSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTLLETIISVLGLTFTLALSAVL
Sequences:
>Translated_453_residues MGAVQGSMLLIYTVIAIAVLILMIARYKVYPFLVLIIVSLGLGLAVGMPMDKIVKSFEGGTGGTLGHIAIVVGLGTMLGK MMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGL IPPHPAALLAVQQYGADIGKTIAYGLIVGVPTAIVAGPLFALTISKFVKLPEHNPLASQFVETRAAGETRELPSFGITLF TILLPVVLMLVGSWADLVFAPKSLPNSLLRFAGNSDVALLIAVLVSFFTFGKLQGFNREQIQKFCGDCLAPIAGITLIVG AGGGFGGILRDSGISQQIVATATHAHLSPLLLGWFVAALIRLATGSATVAMTTACGIVAPIAAASGVTVRPELLVLATGS GSLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTLLETIISVLGLTFTLALSAVL >Mature_452_residues GAVQGSMLLIYTVIAIAVLILMIARYKVYPFLVLIIVSLGLGLAVGMPMDKIVKSFEGGTGGTLGHIAIVVGLGTMLGKM MAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVFFEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLI PPHPAALLAVQQYGADIGKTIAYGLIVGVPTAIVAGPLFALTISKFVKLPEHNPLASQFVETRAAGETRELPSFGITLFT ILLPVVLMLVGSWADLVFAPKSLPNSLLRFAGNSDVALLIAVLVSFFTFGKLQGFNREQIQKFCGDCLAPIAGITLIVGA GGGFGGILRDSGISQQIVATATHAHLSPLLLGWFVAALIRLATGSATVAMTTACGIVAPIAAASGVTVRPELLVLATGSG SLIFSHVNDGGFWLIKEYFGMTVGQTFKTWTLLETIISVLGLTFTLALSAVL
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=450, Percent_Identity=46.4444444444444, Blast_Score=371, Evalue=1e-104, Organism=Escherichia coli, GI1790716, Length=449, Percent_Identity=43.652561247216, Blast_Score=357, Evalue=1e-99, Organism=Escherichia coli, GI1788707, Length=445, Percent_Identity=42.247191011236, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI2367370, Length=455, Percent_Identity=41.5384615384615, Blast_Score=308, Evalue=6e-85, Organism=Escherichia coli, GI1790776, Length=448, Percent_Identity=33.9285714285714, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI48994939, Length=435, Percent_Identity=36.7816091954023, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI1789097, Length=454, Percent_Identity=33.920704845815, Blast_Score=202, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47384; Mature: 47253
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVQGSMLLIYTVIAIAVLILMIARYKVYPFLVLIIVSLGLGLAVGMPMDKIVKSFEGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC TGGTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVF CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLIPPHPAALLAVQQYGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAYGLIVGVPTAIVAGPLFALTISKFVKLPEHNPLASQFVETRAAGETRELPSFGITLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH TILLPVVLMLVGSWADLVFAPKSLPNSLLRFAGNSDVALLIAVLVSFFTFGKLQGFNREQ HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IQKFCGDCLAPIAGITLIVGAGGGFGGILRDSGISQQIVATATHAHLSPLLLGWFVAALI HHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLATGSATVAMTTACGIVAPIAAASGVTVRPELLVLATGSGSLIFSHVNDGGFWLIKEYF HHHCCCCHHHHHHHHHHHHHHHHCCCCEECCEEEEEEECCCCEEEEEECCCCEEEHHHHH GMTVGQTFKTWTLLETIISVLGLTFTLALSAVL CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GAVQGSMLLIYTVIAIAVLILMIARYKVYPFLVLIIVSLGLGLAVGMPMDKIVKSFEGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC TGGTLGHIAIVVGLGTMLGKMMAESGGAERIATTLIDWFGEKNIHWAMMFVAIIVGLPVF CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FEVGFVLLIPIAFNVAKRTGKSLLVVGLPMVAGLSVVHGLIPPHPAALLAVQQYGADIGK HHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH TIAYGLIVGVPTAIVAGPLFALTISKFVKLPEHNPLASQFVETRAAGETRELPSFGITLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH TILLPVVLMLVGSWADLVFAPKSLPNSLLRFAGNSDVALLIAVLVSFFTFGKLQGFNREQ HHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IQKFCGDCLAPIAGITLIVGAGGGFGGILRDSGISQQIVATATHAHLSPLLLGWFVAALI HHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLATGSATVAMTTACGIVAPIAAASGVTVRPELLVLATGSGSLIFSHVNDGGFWLIKEYF HHHCCCCHHHHHHHHHHHHHHHHCCCCEECCEEEEEEECCCCEEEEEECCCCEEEHHHHH GMTVGQTFKTWTLLETIISVLGLTFTLALSAVL CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA