| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813742
Identifier: 237813742
GI number: 237813742
Start: 3405306
End: 3407423
Strand: Direct
Name: 237813742
Synonym: GBP346_A3519
Alternate gene names: NA
Gene position: 3405306-3407423 (Clockwise)
Preceding gene: 237813739
Following gene: 237813743
Centisome position: 83.09
GC content: 70.07
Gene sequence:
>2118_bases ATGTTCGAATCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAGCGCGAGCCATCAGCTCGACGCGCTCCTCGC GACGGCCGACGCGAACGCGCCGTACGCGGAACGCGCCGAATGGCTGATCGAGCTCGCGCACTGGCTGCATCGCGACGGCG CGATGACCGCCGCCGCGCCCGCGCAGCCCGAATCGGGCGAACGCGCGTTCGCCGCGCACGCACGGCTGCGCTACGTATTC CACGTGCTCGACCGCAACCCCGCCTGGAAGACGAATGTCGCGCGCCTGCTGCGCGGCGTGCTGCGCGAAAGCGACGGCAT CTCGCTCCTGTGCGACGCCGGCATGCCCGTGCATTCGGGCTTCTTCGGCGCGCTTGTCGAGCGCATCGATTCGTCGCTGA TTCCGCCCGCGCCGAACCGCCGCGAGCTCGCCGCGCTCTTCACGCTGATGTTTCCGGCGCCCGCCGACGCGCAGTGGATC GACGCGCTGCCCGACGATCTGCTCGCCCGGCTGGCGGAGCTGTTCGCGTTCGACGTGACCGACAAGGAGCGCCACCAGCC CGGCTCGTTCTCGCGCGACCTGCTCGCCGCGCTGCACAACCTCACCTGCCAGATCAGCTCGACGGGGCTGTCGCAGACCG TGCGCAGCCGCCTGTCGGACGAGGATGCGCGCACGCCGCTCGAAGCGCAGCCGTTCTACCGGCTCACGCGCGCGATGCTC GCCGTCGAGACCGCGCAAGCCGCGCTCGACGACGGCGGCGACGCGAGCAAGCTGCTGCACGAGGTCAATTACCTGCGCGT GCTGCTCGACGAGTGCCGCGTGTCGATCGACGACGTGTTCTCGCACCTGTACCGCAACGGCGTATCGGTCGACATCGTGT TCCAGGTCGAGCGCATGCGCATGCGCATCCTGCGCGCGGAGACGCTGCTGAACGCGTGGATGGCGCGCGACGATCTGCGC GGGCTCGCGCGCCTGACGGCCGAGCTCGTCGACGCGAACCAGAACAGCCAGAGCGTGTCGCACCTCGTGCGCAGCAACTT CGCCCTGTTCGCGCGCAAGCTCGTCGAGACGAACGCGGACACGGGCGAGCACTACATCTCGCGCGGCCGCGCCGAATACC TGAAGATGCTGCGCATGGCGGCGGGCGGCGGCCTCGTGACGGTCGCCACCGTCTGCATCAAATTCGGGATCACGGGCGCG CACCTGCAATCGATGTTCGAAGGGCTGCTCGCCGGCATCAACTACGCGGCGAGCTTCATGCTGATGCACTTCCTGCACTT CACGCTCGCGACGAAGCAGCCGGCGATGACCGCGCCGACGATCGCGCGCGAGCTCGACGGCACCGGCCACGACGAAGGCG TGAAGCAGTTCGTGTCGTCGGTGATCGCGCTGATCCGCACGCAGGCGGCCGCGATCTGCGGCAACGTGCTCGTCGTGCTG CCCGTGTGCTTCGCGGTGCAGATGTTCGCGAGCAGCGTGCTGCATGCGAACCTGATCTCGCCGGACAAGGCGCACGCGAC GCTGAAATCGTTCTCGCTGTTCGGCCCGACGCCGATCTACGCGGCGCTCACGGGCGTGCTGCTGTGGGCGTCGAGCCTGC TCGCCGGCTGGGCCGACAACTGGTTCGTGCTGCACTGCGTCGGCGACGCGCTCGCGTACAACCGCCGCCTGCGCATCACG CTCGGCGTCGCGGGCGCGGCAAAGCTCGCGCATTTCTGCCGCTCGAACGTCGCGGGCGTCGTCGGCAACGTCGGGCTCGG GCTGATGCTCGGCCTCGTGCCGGCGATCGTCAGCGCGTTCGCGTTCTCGTTCGAGGTGCGGCACGTGACGCTGTCCGCCG GCTCGATCGGTGTCGCGATCGGCGTGCTCGGCAAGGAAACGCTGCGCTCGGCCGAGCTGTGGTGGGCGGTCGCGGGCGTC TTCAGCATGGCGATCCTCAACGTCGCGGTGAGCTTCGCGCTCGCGTTCACGATGGCGGTACGCTCGCGCAGCCTGCGGCC GACGAAAGTGCGCGCGCTCGTCGCGGCGATCGGCCGCGCGGTGCTCGCGCGGCCGGCGAGCCTCGTGTGGCCGCCGCGCG GCGCAGGCGGCGCGGCGGGCGAATCCCGCGCGCACTGA
Upstream 100 bases:
>100_bases CGACCGAACCGCCGCGCGCGAGCCGCCCTTGCGCCTCGCCGCCGGTTTGCGCAGCATCTCGACAGAAACCTGCCCGTAGG GGCGCCCGATATTCCCGCTT
Downstream 100 bases:
>100_bases GCGCCCGGCGGGCCGCGCACGCCGACGCAGCCGCATGGCGGCGTAACGGCATTAAGACGTAACGGCATCAAGACGTGGCG GCACGGCGGCCTCACCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
Sequences:
>Translated_705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH >Mature_705_residues MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
Specific function: Unknown
COG id: COG4389
COG function: function code L; Site-specific recombinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76300; Mature: 76300
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AQPESGERAFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC WFVLHCVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF CEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AQPESGERAFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC WFVLHCVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF CEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA