| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813739
Identifier: 237813739
GI number: 237813739
Start: 3403617
End: 3404387
Strand: Direct
Name: 237813739
Synonym: GBP346_A3516
Alternate gene names: NA
Gene position: 3403617-3404387 (Clockwise)
Preceding gene: 237813738
Following gene: 237813742
Centisome position: 83.04
GC content: 76.01
Gene sequence:
>771_bases ATGACCGCACGCTTGCTCCGCCCGGCGCGGGTTTCGCGCGCCGCGGCCGCCGCGGCAACCGTTGCGGCGGCGGCCATGCT CGCGGCCTGCTCGTCGTCGCCGCCCGCGCGCTTCTATACGCTCGACGCGGCGGCCGCCGCCGGCGCCGCCGCGAGCGTCA GCGCGAATCCCGCGTTCCTGATCCAGGTGCCGTCCGTCGACGTGCCGGAACAGGTCGCGAAGAATCAGCTCGTCGTGCAG AAGAACGCCGCCCAGGTCGACGTGCTCGAGCAGGAGCGCTGGGCGGCGCCGCCCGCCGACGAGATCCGGCGCGCGCTGTC GTCGGCGCTCACGCGGCGGCTCGACACGATCGACGTCGCGAACGCCGCGTATCCGGCCAACGTGCCCGTCTATCGGGTCA GCGTGAACGTGCAGCGCTTCGAATCGTGGCCGGGCCGGCATGCGGCGCTCGCGGCCGTCTGGAGCGTGCGCGCACTGCCG AGCCAGGCGGTGATGACCTGCCGCACCGACGTCGTCGAGCCGGTGCCGGCGGGCTACGACGCGCTCGTCGCGGGCCACCG CGAGGCGATCGGCGCGCTCGCCGACCAGATCGCGGCCGGCGTGCGCGCGATGGCGGCGGCGCGCGCGCGCGGCGCGGCGA ACTGGAACGACGCGACGGCGAAAAAGGCGGCAGCGAGCAAGGCGGCGGCCGACGACGCATCGGCGCCCGTCGCGCGCTGC CCGGCGGGGCCGGCCGCGGCGGATTCGCAGCGCATCGGCGACACGCCGTGA
Upstream 100 bases:
>100_bases TCAAGGAGCTCACGCGCACGCTGCAATCGCTGAACGCGCTCGCCGACTACCTCGAGCGGCATCCCGAATCGCTGCTGAAA GGCAAACCAGGAGATCAGAA
Downstream 100 bases:
>100_bases CGCGTGCGTGGCTGGCCGCGGGATGCGCGCGATCGGGGGGCGCGAATGGACTCGGCCACCGCCTCGGCAGCGCACGCTTC GGGTGACTTGATCGGTTCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MTARLLRPARVSRAAAAAATVAAAAMLAACSSSPPARFYTLDAAAAAGAAASVSANPAFLIQVPSVDVPEQVAKNQLVVQ KNAAQVDVLEQERWAAPPADEIRRALSSALTRRLDTIDVANAAYPANVPVYRVSVNVQRFESWPGRHAALAAVWSVRALP SQAVMTCRTDVVEPVPAGYDALVAGHREAIGALADQIAAGVRAMAAARARGAANWNDATAKKAAASKAAADDASAPVARC PAGPAAADSQRIGDTP
Sequences:
>Translated_256_residues MTARLLRPARVSRAAAAAATVAAAAMLAACSSSPPARFYTLDAAAAAGAAASVSANPAFLIQVPSVDVPEQVAKNQLVVQ KNAAQVDVLEQERWAAPPADEIRRALSSALTRRLDTIDVANAAYPANVPVYRVSVNVQRFESWPGRHAALAAVWSVRALP SQAVMTCRTDVVEPVPAGYDALVAGHREAIGALADQIAAGVRAMAAARARGAANWNDATAKKAAASKAAADDASAPVARC PAGPAAADSQRIGDTP >Mature_255_residues TARLLRPARVSRAAAAAATVAAAAMLAACSSSPPARFYTLDAAAAAGAAASVSANPAFLIQVPSVDVPEQVAKNQLVVQK NAAQVDVLEQERWAAPPADEIRRALSSALTRRLDTIDVANAAYPANVPVYRVSVNVQRFESWPGRHAALAAVWSVRALPS QAVMTCRTDVVEPVPAGYDALVAGHREAIGALADQIAAGVRAMAAARARGAANWNDATAKKAAASKAAADDASAPVARCP AGPAAADSQRIGDTP
Specific function: Unknown
COG id: COG3009
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26190; Mature: 26059
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARLLRPARVSRAAAAAATVAAAAMLAACSSSPPARFYTLDAAAAAGAAASVSANPAFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHCCCCCCEEE IQVPSVDVPEQVAKNQLVVQKNAAQVDVLEQERWAAPPADEIRRALSSALTRRLDTIDVA EECCCCCCHHHHHHCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC NAAYPANVPVYRVSVNVQRFESWPGRHAALAAVWSVRALPSQAVMTCRTDVVEPVPAGYD CCCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHH ALVAGHREAIGALADQIAAGVRAMAAARARGAANWNDATAKKAAASKAAADDASAPVARC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHC PAGPAAADSQRIGDTP CCCCCCCCCCCCCCCC >Mature Secondary Structure TARLLRPARVSRAAAAAATVAAAAMLAACSSSPPARFYTLDAAAAAGAAASVSANPAFL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCHHCCCCCCEEE IQVPSVDVPEQVAKNQLVVQKNAAQVDVLEQERWAAPPADEIRRALSSALTRRLDTIDVA EECCCCCCHHHHHHCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC NAAYPANVPVYRVSVNVQRFESWPGRHAALAAVWSVRALPSQAVMTCRTDVVEPVPAGYD CCCCCCCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHH ALVAGHREAIGALADQIAAGVRAMAAARARGAANWNDATAKKAAASKAAADDASAPVARC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHC PAGPAAADSQRIGDTP CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA