Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237813742

Identifier: 237813742

GI number: 237813742

Start: 3405306

End: 3407423

Strand: Direct

Name: 237813742

Synonym: GBP346_A3519

Alternate gene names: NA

Gene position: 3405306-3407423 (Clockwise)

Preceding gene: 237813739

Following gene: 237813743

Centisome position: 83.09

GC content: 70.07

Gene sequence:

>2118_bases
ATGTTCGAATCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAGCGCGAGCCATCAGCTCGACGCGCTCCTCGC
GACGGCCGACGCGAACGCGCCGTACGCGGAACGCGCCGAATGGCTGATCGAGCTCGCGCACTGGCTGCATCGCGACGGCG
CGATGACCGCCGCCGCGCCCGCGCAGCCCGAATCGGGCGAACGCGCGTTCGCCGCGCACGCACGGCTGCGCTACGTATTC
CACGTGCTCGACCGCAACCCCGCCTGGAAGACGAATGTCGCGCGCCTGCTGCGCGGCGTGCTGCGCGAAAGCGACGGCAT
CTCGCTCCTGTGCGACGCCGGCATGCCCGTGCATTCGGGCTTCTTCGGCGCGCTTGTCGAGCGCATCGATTCGTCGCTGA
TTCCGCCCGCGCCGAACCGCCGCGAGCTCGCCGCGCTCTTCACGCTGATGTTTCCGGCGCCCGCCGACGCGCAGTGGATC
GACGCGCTGCCCGACGATCTGCTCGCCCGGCTGGCGGAGCTGTTCGCGTTCGACGTGACCGACAAGGAGCGCCACCAGCC
CGGCTCGTTCTCGCGCGACCTGCTCGCCGCGCTGCACAACCTCACCTGCCAGATCAGCTCGACGGGGCTGTCGCAGACCG
TGCGCAGCCGCCTGTCGGACGAGGATGCGCGCACGCCGCTCGAAGCGCAGCCGTTCTACCGGCTCACGCGCGCGATGCTC
GCCGTCGAGACCGCGCAAGCCGCGCTCGACGACGGCGGCGACGCGAGCAAGCTGCTGCACGAGGTCAATTACCTGCGCGT
GCTGCTCGACGAGTGCCGCGTGTCGATCGACGACGTGTTCTCGCACCTGTACCGCAACGGCGTATCGGTCGACATCGTGT
TCCAGGTCGAGCGCATGCGCATGCGCATCCTGCGCGCGGAGACGCTGCTGAACGCGTGGATGGCGCGCGACGATCTGCGC
GGGCTCGCGCGCCTGACGGCCGAGCTCGTCGACGCGAACCAGAACAGCCAGAGCGTGTCGCACCTCGTGCGCAGCAACTT
CGCCCTGTTCGCGCGCAAGCTCGTCGAGACGAACGCGGACACGGGCGAGCACTACATCTCGCGCGGCCGCGCCGAATACC
TGAAGATGCTGCGCATGGCGGCGGGCGGCGGCCTCGTGACGGTCGCCACCGTCTGCATCAAATTCGGGATCACGGGCGCG
CACCTGCAATCGATGTTCGAAGGGCTGCTCGCCGGCATCAACTACGCGGCGAGCTTCATGCTGATGCACTTCCTGCACTT
CACGCTCGCGACGAAGCAGCCGGCGATGACCGCGCCGACGATCGCGCGCGAGCTCGACGGCACCGGCCACGACGAAGGCG
TGAAGCAGTTCGTGTCGTCGGTGATCGCGCTGATCCGCACGCAGGCGGCCGCGATCTGCGGCAACGTGCTCGTCGTGCTG
CCCGTGTGCTTCGCGGTGCAGATGTTCGCGAGCAGCGTGCTGCATGCGAACCTGATCTCGCCGGACAAGGCGCACGCGAC
GCTGAAATCGTTCTCGCTGTTCGGCCCGACGCCGATCTACGCGGCGCTCACGGGCGTGCTGCTGTGGGCGTCGAGCCTGC
TCGCCGGCTGGGCCGACAACTGGTTCGTGCTGCACTGCGTCGGCGACGCGCTCGCGTACAACCGCCGCCTGCGCATCACG
CTCGGCGTCGCGGGCGCGGCAAAGCTCGCGCATTTCTGCCGCTCGAACGTCGCGGGCGTCGTCGGCAACGTCGGGCTCGG
GCTGATGCTCGGCCTCGTGCCGGCGATCGTCAGCGCGTTCGCGTTCTCGTTCGAGGTGCGGCACGTGACGCTGTCCGCCG
GCTCGATCGGTGTCGCGATCGGCGTGCTCGGCAAGGAAACGCTGCGCTCGGCCGAGCTGTGGTGGGCGGTCGCGGGCGTC
TTCAGCATGGCGATCCTCAACGTCGCGGTGAGCTTCGCGCTCGCGTTCACGATGGCGGTACGCTCGCGCAGCCTGCGGCC
GACGAAAGTGCGCGCGCTCGTCGCGGCGATCGGCCGCGCGGTGCTCGCGCGGCCGGCGAGCCTCGTGTGGCCGCCGCGCG
GCGCAGGCGGCGCGGCGGGCGAATCCCGCGCGCACTGA

Upstream 100 bases:

>100_bases
CGACCGAACCGCCGCGCGCGAGCCGCCCTTGCGCCTCGCCGCCGGTTTGCGCAGCATCTCGACAGAAACCTGCCCGTAGG
GGCGCCCGATATTCCCGCTT

Downstream 100 bases:

>100_bases
GCGCCCGGCGGGCCGCGCACGCCGACGCAGCCGCATGGCGGCGTAACGGCATTAAGACGTAACGGCATCAAGACGTGGCG
GCACGGCGGCCTCACCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH

Sequences:

>Translated_705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
>Mature_705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERAFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHCVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH

Specific function: Unknown

COG id: COG4389

COG function: function code L; Site-specific recombinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76300; Mature: 76300

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AQPESGERAFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH
MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
WFVLHCVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF
CEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV
HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AQPESGERAFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH
MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVCFAVQMFASSVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
WFVLHCVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF
CEEEEEHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV
HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA