| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813593
Identifier: 237813593
GI number: 237813593
Start: 3253340
End: 3253897
Strand: Reverse
Name: 237813593
Synonym: GBP346_A3369
Alternate gene names: NA
Gene position: 3253897-3253340 (Counterclockwise)
Preceding gene: 237813594
Following gene: 237813592
Centisome position: 79.39
GC content: 72.04
Gene sequence:
>558_bases ATGTTCCGGGCGCGCCCGACGCCGTGCGACGCGCCGCGACGGCGCGAGCCGCGGATGCGCGGTTCGCGGGGCGTCGCGCT GCCGGGCGTACTTGCCGTAACGGCTTCGCTCATCGTGATGTCGTTCGCTTGGTTCGAGATCGCGAAGACGGAGGTCCGGC GTATGACGAGCGTCGCGAGCCGATCCATTGCATTTCGTGCGGCGGATGCCGCGCTCGAAGCATGCGTGATCGCGCTGGAG AGTGGAGCGGCGCCACACCCGTCGGCGGGCGACGGTACGACGTCGACGCGCGAGCCGGGCGGCTGGCGCGAACCGGGCGC GTTCGATGGCATCGGTGCGTTCAGGCCGTACGCCGGATGGCCGGGCGCGGCGCAGGCGCCGAGTTGCTTGATCGAAGCAT GGAGGCTGCCGGCGCGCCCCGACGTGCGCGCCTTCCTCGTAACCGCGCGCGGCGTGGGCGCATCGAACGATACGGCCGAG TGGCTGCAATTGCAGGTTGCGCTCGACGGCGGGCGCGTCGAGCGCCGGTGGCGTCGGGTCGTGGGACGGCCGGCATAG
Upstream 100 bases:
>100_bases ACACCCGCGCGAGACTGGCGTGGCGGCGCTATGTGGCGGTCCGTAACCGAGCCGGCACATGATGCGCGTCATGGTCGGGG TGGATGTGGAGCGACTGCCG
Downstream 100 bases:
>100_bases GCAACGGGAGGCATGAGCGATGCCATGTACGGGGCGCAATTCGCCCTCGAGAGGCTTCACCTTAATCGAGGTGGTCGTCG CGATCGCGATCGTGGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFRARPTPCDAPRRREPRMRGSRGVALPGVLAVTASLIVMSFAWFEIAKTEVRRMTSVASRSIAFRAADAALEACVIALE SGAAPHPSAGDGTTSTREPGGWREPGAFDGIGAFRPYAGWPGAAQAPSCLIEAWRLPARPDVRAFLVTARGVGASNDTAE WLQLQVALDGGRVERRWRRVVGRPA
Sequences:
>Translated_185_residues MFRARPTPCDAPRRREPRMRGSRGVALPGVLAVTASLIVMSFAWFEIAKTEVRRMTSVASRSIAFRAADAALEACVIALE SGAAPHPSAGDGTTSTREPGGWREPGAFDGIGAFRPYAGWPGAAQAPSCLIEAWRLPARPDVRAFLVTARGVGASNDTAE WLQLQVALDGGRVERRWRRVVGRPA >Mature_185_residues MFRARPTPCDAPRRREPRMRGSRGVALPGVLAVTASLIVMSFAWFEIAKTEVRRMTSVASRSIAFRAADAALEACVIALE SGAAPHPSAGDGTTSTREPGGWREPGAFDGIGAFRPYAGWPGAAQAPSCLIEAWRLPARPDVRAFLVTARGVGASNDTAE WLQLQVALDGGRVERRWRRVVGRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19866; Mature: 19866
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRARPTPCDAPRRREPRMRGSRGVALPGVLAVTASLIVMSFAWFEIAKTEVRRMTSVAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIAFRAADAALEACVIALESGAAPHPSAGDGTTSTREPGGWREPGAFDGIGAFRPYAGW HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAAQAPSCLIEAWRLPARPDVRAFLVTARGVGASNDTAEWLQLQVALDGGRVERRWRRV CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHH VGRPA HCCCC >Mature Secondary Structure MFRARPTPCDAPRRREPRMRGSRGVALPGVLAVTASLIVMSFAWFEIAKTEVRRMTSVAS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSIAFRAADAALEACVIALESGAAPHPSAGDGTTSTREPGGWREPGAFDGIGAFRPYAGW HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAAQAPSCLIEAWRLPARPDVRAFLVTARGVGASNDTAEWLQLQVALDGGRVERRWRRV CCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHH VGRPA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA