| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813590
Identifier: 237813590
GI number: 237813590
Start: 3251866
End: 3252255
Strand: Direct
Name: 237813590
Synonym: GBP346_A3366
Alternate gene names: NA
Gene position: 3251866-3252255 (Clockwise)
Preceding gene: 237813589
Following gene: 237813591
Centisome position: 79.34
GC content: 66.67
Gene sequence:
>390_bases ATGACGACAGAAACCTCATCGCACCAGTCCGGGCACGGACCGCTGCGCCGCCTGCTCGGCTCGGTGCTCGCGCTCCTGCA GACCCGGCTCGAACTCGTCGGCATCGAACTCGCCGAGGAGAAGGAACGCCTGATGGGCGTACTCTTTGTCGGGCTCGCCG CGATGATGCTCGCGACGATGGCGCTCATCAGCCTGACGGTGCTCATTGCGATCGCGTTCTGGGATACGTACCGCTGGCAA TCGCTCGCCGTCGTCACCGCGCTCTACGCGCTCGGCGCACTCGCCTGCTGGCTGAAGGCGCGCTCGGGACTGCGCGACGC GCCCAGCGTGTTCGAGGCGACGCTGAACGAACTCGAAAAGGACCGCGAGCTGTTCCGCGGCAAGCCGTGA
Upstream 100 bases:
>100_bases AGCCCCCGGCTCGCCGCCGCGTGACGGCCGGGGCCCTGCGCTCCGGCCCGCCGCGCCCAGTTGCGACGCCGGCCGTTCTC CGCGCGCAAGCGCCTCTTTC
Downstream 100 bases:
>100_bases ACGCGCGGCTGCACTCCTTCCCTTCCCGCCCATCTCACGCCGACGCGCCATGAGTTACTCCGCTCCGGAACAACGATTCC ACACCGCTTCGCAGAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTTETSSHQSGHGPLRRLLGSVLALLQTRLELVGIELAEEKERLMGVLFVGLAAMMLATMALISLTVLIAIAFWDTYRWQ SLAVVTALYALGALACWLKARSGLRDAPSVFEATLNELEKDRELFRGKP
Sequences:
>Translated_129_residues MTTETSSHQSGHGPLRRLLGSVLALLQTRLELVGIELAEEKERLMGVLFVGLAAMMLATMALISLTVLIAIAFWDTYRWQ SLAVVTALYALGALACWLKARSGLRDAPSVFEATLNELEKDRELFRGKP >Mature_128_residues TTETSSHQSGHGPLRRLLGSVLALLQTRLELVGIELAEEKERLMGVLFVGLAAMMLATMALISLTVLIAIAFWDTYRWQS LAVVTALYALGALACWLKARSGLRDAPSVFEATLNELEKDRELFRGKP
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14202; Mature: 14071
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTETSSHQSGHGPLRRLLGSVLALLQTRLELVGIELAEEKERLMGVLFVGLAAMMLATM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALISLTVLIAIAFWDTYRWQSLAVVTALYALGALACWLKARSGLRDAPSVFEATLNELEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DRELFRGKP HHHHHCCCC >Mature Secondary Structure TTETSSHQSGHGPLRRLLGSVLALLQTRLELVGIELAEEKERLMGVLFVGLAAMMLATM CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALISLTVLIAIAFWDTYRWQSLAVVTALYALGALACWLKARSGLRDAPSVFEATLNELEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH DRELFRGKP HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA