| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813591
Identifier: 237813591
GI number: 237813591
Start: 3252359
End: 3252763
Strand: Direct
Name: 237813591
Synonym: GBP346_A3367
Alternate gene names: NA
Gene position: 3252359-3252763 (Clockwise)
Preceding gene: 237813590
Following gene: 237813599
Centisome position: 79.35
GC content: 67.9
Gene sequence:
>405_bases ATGAGCGCGGCCCAGTACCGCGCGCTGCGCAAGGAACTGCTGATCCTGCGCTCGGATGTCGAGCGCCTGGAACTCGCGCA GGCCGGCGCCGAGCTGCGCCAATCCATCACCCATTTCAAATGGCTGAAGCTCCTCGTGCCCGGGGTGTCGGGTGGGTCGC TCGGCAAATCGGCGAGGAACGTGAACGCGACGCTCGGCATGCTCGTCAGCCAATATCCGCTATTGAGCTCGCTGGCGTCG GTCGTGCTCGCCAAGCCCGTGCGCGCACTGTTGCGCGCAAGCGCGCGCCCCGCGCTCAAATGGGGCGCTGTCGGCTTCGC GCTCTGGGAGGGCTACCAGATCTGGAAACAGGCGAAGCACGACGACGCATCCGACGCCGGGGCGCGGCAACGCACGCGCC CGTAG
Upstream 100 bases:
>100_bases CGCGGCTGCACTCCTTCCCTTCCCGCCCATCTCACGCCGACGCGCCATGAGTTACTCCGCTCCGGAACAACGATTCCACA CCGCTTCGCAGAGGCGGCAC
Downstream 100 bases:
>100_bases CGACACGCCCAGGACGCCCATGGCGCCCGTCGACCGAGCCGGCGCGCCGACCGCGCCGGCCGGCTGCCGGCGCCGGGGAG ATCGACACGCCCGGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSAAQYRALRKELLILRSDVERLELAQAGAELRQSITHFKWLKLLVPGVSGGSLGKSARNVNATLGMLVSQYPLLSSLAS VVLAKPVRALLRASARPALKWGAVGFALWEGYQIWKQAKHDDASDAGARQRTRP
Sequences:
>Translated_134_residues MSAAQYRALRKELLILRSDVERLELAQAGAELRQSITHFKWLKLLVPGVSGGSLGKSARNVNATLGMLVSQYPLLSSLAS VVLAKPVRALLRASARPALKWGAVGFALWEGYQIWKQAKHDDASDAGARQRTRP >Mature_133_residues SAAQYRALRKELLILRSDVERLELAQAGAELRQSITHFKWLKLLVPGVSGGSLGKSARNVNATLGMLVSQYPLLSSLASV VLAKPVRALLRASARPALKWGAVGFALWEGYQIWKQAKHDDASDAGARQRTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14648; Mature: 14517
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAQYRALRKELLILRSDVERLELAQAGAELRQSITHFKWLKLLVPGVSGGSLGKSARN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VNATLGMLVSQYPLLSSLASVVLAKPVRALLRASARPALKWGAVGFALWEGYQIWKQAKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC DDASDAGARQRTRP CCCCCCCCCCCCCC >Mature Secondary Structure SAAQYRALRKELLILRSDVERLELAQAGAELRQSITHFKWLKLLVPGVSGGSLGKSARN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH VNATLGMLVSQYPLLSSLASVVLAKPVRALLRASARPALKWGAVGFALWEGYQIWKQAKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC DDASDAGARQRTRP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA