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The map label for this gene is ydhP [H]

Identifier: 237813574

GI number: 237813574

Start: 3235905

End: 3237074

Strand: Direct

Name: ydhP [H]

Synonym: GBP346_A3350

Alternate gene names: 237813574

Gene position: 3235905-3237074 (Clockwise)

Preceding gene: 237813573

Following gene: 237813575

Centisome position: 78.95

GC content: 71.2

Gene sequence:

>1170_bases
ATGCCACTGCCTCTGTTTGCCCTTGCCGTTGCCGCGTTTGGCATCGGTACCACCGAGTTCGTCATCATGGGGCTCCTGCC
GAATGTCGCGCGCGATCTGGGCGTGTCGATTCCGGCGGCGGGCATGCTCGTGTCCGGCTATGCGCTCGGCGTGACGATCG
GCGCGCCGATCCTCGCCGTCGTCACCGCGAAAATGCCGCGCAAGGCGGCGCTGCTCGCGCTGATCGGCGTGTTCATCGTC
GGTAATCTGTTTTGCGCGATCGCGCCCGGCTACGCGACGCTGATGGTCGCGCGCGTCGTCACCGCGTTCTGCCACGGTGC
GTTCTTCGGCATCGGCTCGGTGGTCGCGAGCAACCTCGTCGCGCCGAACAAGCGCGCGCAGGCGATCGCGCTGATGTTCA
CCGGCCTCACGCTCGCGAACGTGCTCGGCGTGCCGCTCGGCACCGCGCTCGGCCAGGCGTTCGGCTGGCGCGCGACGTTC
TGGGCCGTCACCGGCATCGGCGCGCTCGCCGCGGCGGCGCTCGCCTTCTGCGTGCCGAAGCGCCTCGAGATGCCCGCGGC
CGGCATCGCGCGCGAGTTCGGCGTGCTGCGCAACCCGCAGGTGCTGATGGTGCTCGGCATCAGCGTGCTCGCGTCGGCGA
GCCTCTTCACCGTGTTCACGTACATCGCGCCGATCCTCGAGGACGTGACGGGCTTCACGCCGCACGACGTCACGCTCGTG
CTGCTGCTGTTCGGCCTCGGGCTGACGGTCGGCGGCACCGTCGGCGGCAAGCTCGCCGACTGGCGGCGGATGCCGTCGCT
CGTCGCGACGCTCGCGTCGATCGGCGTCGTGCTCGCCGCGTTCGCGGGCACGATGCGCACACCGCTGCCCGCGCTCGTGA
CGATTTTCGTGTGGGGCGTGCTCGCGTTCGCGATCGTGCCGCCGCTGCAGATCCTGATCGTCGATCGCGCGAGCCACGCG
CCGAATCTCGCGTCGACGCTCAACCAGGGCGCGTTCAATCTCGGCAACGCGCTCGGCGCGTGGCTCGGCGGCACCGCGAT
CCACGCGGGCGTGCCGCTCGCGAAACTGCCGTGGGCGGGCGCCGCGCTCGCGATGGCCGCGCTCGCGCTCACGCTGTGGT
CCGCATCGCTCGAGCGGCGTGCGGTTCCGGGGCCGGCCGGATGCGCGTGA

Upstream 100 bases:

>100_bases
AAGGGTTTTCCCTGAGATAGAATCGCCCCTGTTCCGCCCGCCTCCATCGGCGCGCCGCATCCCGCGGCGCCGGACGCGGC
GGTCCTCCCGCGAGTCTTCC

Downstream 100 bases:

>100_bases
CGCGCCGCGCAGCGCACGCATCGCACACGGCATGCACGGCAGGCATGCCGCTCCATGCCGCTCAAGGCGCGGCGCCGTAC
GCGGCACGCTCGCGCATCGG

Product: inner membrane transport protein YdhP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTAKMPRKAALLALIGVFIV
GNLFCAIAPGYATLMVARVVTAFCHGAFFGIGSVVASNLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATF
WAVTGIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYIAPILEDVTGFTPHDVTLV
LLLFGLGLTVGGTVGGKLADWRRMPSLVATLASIGVVLAAFAGTMRTPLPALVTIFVWGVLAFAIVPPLQILIVDRASHA
PNLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRAVPGPAGCA

Sequences:

>Translated_389_residues
MPLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTAKMPRKAALLALIGVFIV
GNLFCAIAPGYATLMVARVVTAFCHGAFFGIGSVVASNLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATF
WAVTGIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYIAPILEDVTGFTPHDVTLV
LLLFGLGLTVGGTVGGKLADWRRMPSLVATLASIGVVLAAFAGTMRTPLPALVTIFVWGVLAFAIVPPLQILIVDRASHA
PNLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRAVPGPAGCA
>Mature_388_residues
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAVVTAKMPRKAALLALIGVFIVG
NLFCAIAPGYATLMVARVVTAFCHGAFFGIGSVVASNLVAPNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATFW
AVTGIGALAAAALAFCVPKRLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYIAPILEDVTGFTPHDVTLVL
LLFGLGLTVGGTVGGKLADWRRMPSLVATLASIGVVLAAFAGTMRTPLPALVTIFVWGVLAFAIVPPLQILIVDRASHAP
NLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAGAALAMAALALTLWSASLERRAVPGPAGCA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=379, Percent_Identity=46.9656992084433, Blast_Score=293, Evalue=9e-81,
Organism=Escherichia coli, GI1786595, Length=384, Percent_Identity=34.8958333333333, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1787808, Length=381, Percent_Identity=31.496062992126, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI145693198, Length=335, Percent_Identity=25.6716417910448, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39547; Mature: 39416

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PLPLFALAVAAFGIGTTEFVIMGLLPNVARDLGVSIPAAGMLVSGYALGVTIGAPILAV
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VTAKMPRKAALLALIGVFIVGNLFCAIAPGYATLMVARVVTAFCHGAFFGIGSVVASNLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNKRAQAIALMFTGLTLANVLGVPLGTALGQAFGWRATFWAVTGIGALAAAALAFCVPK
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RLEMPAAGIAREFGVLRNPQVLMVLGISVLASASLFTVFTYIAPILEDVTGFTPHDVTLV
HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLLFGLGLTVGGTVGGKLADWRRMPSLVATLASIGVVLAAFAGTMRTPLPALVTIFVWGV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAFAIVPPLQILIVDRASHAPNLASTLNQGAFNLGNALGAWLGGTAIHAGVPLAKLPWAG
HHHHHHCCHHEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHCCCCHHHCCCCH
AALAMAALALTLWSASLERRAVPGPAGCA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]