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The map label for this gene is yfkF [H]

Identifier: 237813575

GI number: 237813575

Start: 3237359

End: 3238528

Strand: Direct

Name: yfkF [H]

Synonym: GBP346_A3351

Alternate gene names: 237813575

Gene position: 3237359-3238528 (Clockwise)

Preceding gene: 237813574

Following gene: 237813583

Centisome position: 78.99

GC content: 70.94

Gene sequence:

>1170_bases
ATGAAAACCATCCTCACCCGCGATTTTCTCGCGCTCATTCTCAGCGTCGCCGTCGTCGGCCTGGGCACCGGCGCGACCCT
CCCCCTCACGGCGCTCGCGCTCACCGAAGCGGGCCACGGCACCCGCATCGTCGGCATCCTGACCGCCGCACAGGCGGGCG
GCGGCCTCGCCGTCGTGCCGTTCGTCACGGCGATCACGAAGCGGCTGGGCGCACGGCAGGTGATCGTCGCATCGGTGGTC
GTGCTCGCCGCGGCGACCGCGCTGATGCAGTTCACGTCGAACCTCGTCGTCTGGGGTGTGCTGCGCGTCGTCTGCGGCGC
CGCGCTGATGCTGCTCTTCACGATCGGCGAAGCCTGGGTCAACCAGCTCGCCGACGATGCGACACGCGGGCGCGTCGTCG
CGATCTACGCGACGAACTTCACGCTGTTCCAGATGGCGGGGCCCGTGCTCGTGAGCCAGATCGCCGGCATGACGCACGTG
CGTTTCGCGCTGAGCGGCGCGCTCTTTCTGCTCGCGCTGCCGTCGCTCGCGTCGATCCGCAAAACGCCCATCGCCGACGA
GCCGCATCACGACGCGCACGACCGCTGGACCCGCGTGATACCGAAGATGCCCGCGCTCGTCGTCGGCACCGCGTTCTTCG
CGCTGTTCGACACGCTCGCGCTGTCGCTACTGCCGATCTTCGCGATGGCGCGCGGCGTCGCGAGCGAAGCGGCCGTGCTG
TTCGCGGCGATCCTGCTGTTCGGCGACACCGCGATGCAGTTCCCGATCGGCTGGCTCGCCGACAAACTCGGCCGCGAACG
CGTGCACCTCGGCGCGGGATGCGTCGTGCTCGCGTTGCTGCCGCTGCTGCCCGCCGTCGTCACGACACCGTGGCTCTGCT
GGCCGCTTCTTTTCGTGCTCGGCGCGGCGGCGGGCAGCGTCTACACGCTGTCGCTCGTCGCGTGCGGCGAGCGCTTTCGC
GGCTCGGCGCTCGTGACCGCGAGCTCGCTCGTGTCGGCGTCGTGGAGCGCGGCGAGCTTCGGCGGGCCGCTCGTCGCGGG
CGCGCTGATGGAGCAGTTCGGCGGCGACGCGCTGATCGGCGTGCTGATCGTGTCGGCGATCGCGTTCGTCGGCGCGGCGC
TGTGGGAGCGGCGCGCGCTGCCGATGCAGGCGGCCCGGTGGAGACGTTGA

Upstream 100 bases:

>100_bases
CCACAGCGCGTGAAAATCGCGCGCAATAAGGTGCAATAACGCGCGATCGAGCGCAACGGCGCGACGCTAAGCCGTGCGCC
GGTGTAGCATCACGGCCGTC

Downstream 100 bases:

>100_bases
CGCGTTGATGCGATGACGTGAATCGCGCCGGGCGCGGCGCCCGGGTTCGCCGCGACGAACGTGCCAATGCGTTCGCCCGC
GCACCGCGCGAAGCAGCGGG

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKTILTRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTRIVGILTAAQAGGGLAVVPFVTAITKRLGARQVIVASVV
VLAAATALMQFTSNLVVWGVLRVVCGAALMLLFTIGEAWVNQLADDATRGRVVAIYATNFTLFQMAGPVLVSQIAGMTHV
RFALSGALFLLALPSLASIRKTPIADEPHHDAHDRWTRVIPKMPALVVGTAFFALFDTLALSLLPIFAMARGVASEAAVL
FAAILLFGDTAMQFPIGWLADKLGRERVHLGAGCVVLALLPLLPAVVTTPWLCWPLLFVLGAAAGSVYTLSLVACGERFR
GSALVTASSLVSASWSAASFGGPLVAGALMEQFGGDALIGVLIVSAIAFVGAALWERRALPMQAARWRR

Sequences:

>Translated_389_residues
MKTILTRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTRIVGILTAAQAGGGLAVVPFVTAITKRLGARQVIVASVV
VLAAATALMQFTSNLVVWGVLRVVCGAALMLLFTIGEAWVNQLADDATRGRVVAIYATNFTLFQMAGPVLVSQIAGMTHV
RFALSGALFLLALPSLASIRKTPIADEPHHDAHDRWTRVIPKMPALVVGTAFFALFDTLALSLLPIFAMARGVASEAAVL
FAAILLFGDTAMQFPIGWLADKLGRERVHLGAGCVVLALLPLLPAVVTTPWLCWPLLFVLGAAAGSVYTLSLVACGERFR
GSALVTASSLVSASWSAASFGGPLVAGALMEQFGGDALIGVLIVSAIAFVGAALWERRALPMQAARWRR
>Mature_389_residues
MKTILTRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTRIVGILTAAQAGGGLAVVPFVTAITKRLGARQVIVASVV
VLAAATALMQFTSNLVVWGVLRVVCGAALMLLFTIGEAWVNQLADDATRGRVVAIYATNFTLFQMAGPVLVSQIAGMTHV
RFALSGALFLLALPSLASIRKTPIADEPHHDAHDRWTRVIPKMPALVVGTAFFALFDTLALSLLPIFAMARGVASEAAVL
FAAILLFGDTAMQFPIGWLADKLGRERVHLGAGCVVLALLPLLPAVVTTPWLCWPLLFVLGAAAGSVYTLSLVACGERFR
GSALVTASSLVSASWSAASFGGPLVAGALMEQFGGDALIGVLIVSAIAFVGAALWERRALPMQAARWRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=354, Percent_Identity=22.5988700564972, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40585; Mature: 40585

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILTRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTRIVGILTAAQAGGGLAVVP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHCCCCCEEHHH
FVTAITKRLGARQVIVASVVVLAAATALMQFTSNLVVWGVLRVVCGAALMLLFTIGEAWV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLADDATRGRVVAIYATNFTLFQMAGPVLVSQIAGMTHVRFALSGALFLLALPSLASIR
HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KTPIADEPHHDAHDRWTRVIPKMPALVVGTAFFALFDTLALSLLPIFAMARGVASEAAVL
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAILLFGDTAMQFPIGWLADKLGRERVHLGAGCVVLALLPLLPAVVTTPWLCWPLLFVL
HHHHHHHCCHHHHCCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
GAAAGSVYTLSLVACGERFRGSALVTASSLVSASWSAASFGGPLVAGALMEQFGGDALIG
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VLIVSAIAFVGAALWERRALPMQAARWRR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKTILTRDFLALILSVAVVGLGTGATLPLTALALTEAGHGTRIVGILTAAQAGGGLAVVP
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHCCCCCEEHHH
FVTAITKRLGARQVIVASVVVLAAATALMQFTSNLVVWGVLRVVCGAALMLLFTIGEAWV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLADDATRGRVVAIYATNFTLFQMAGPVLVSQIAGMTHVRFALSGALFLLALPSLASIR
HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KTPIADEPHHDAHDRWTRVIPKMPALVVGTAFFALFDTLALSLLPIFAMARGVASEAAVL
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAAILLFGDTAMQFPIGWLADKLGRERVHLGAGCVVLALLPLLPAVVTTPWLCWPLLFVL
HHHHHHHCCHHHHCCHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
GAAAGSVYTLSLVACGERFRGSALVTASSLVSASWSAASFGGPLVAGALMEQFGGDALIG
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VLIVSAIAFVGAALWERRALPMQAARWRR
HHHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]