| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237813532
Identifier: 237813532
GI number: 237813532
Start: 3191891
End: 3192103
Strand: Direct
Name: 237813532
Synonym: GBP346_A3309
Alternate gene names: NA
Gene position: 3191891-3192103 (Clockwise)
Preceding gene: 237813531
Following gene: 237813539
Centisome position: 77.88
GC content: 67.61
Gene sequence:
>213_bases GTGACGCGCTTGCCCCTTTCAGCGCGATCGCGATGCCCGCGAGCCGCGCACGCCGGCGTAACGGCATGCGCGGCAGCCCT CGCATCAGGCGACTTTCCCGTCGCTCGTCGTCTTGCGAACGCGGCGGCTCCTGGCAGCCGCGTTCTCGCCATGCACGTGG AACGGCTCATGATCGACGAGCCGCCCCACGTCGAAACCGTGACGAATTACTGA
Upstream 100 bases:
>100_bases ATCGGGCTCCGAAGCATCGGCACAACGGTCCTCTCGCCTTCATGCTCGTCTCGCGTGCCTGCGCGCGTCTCGCGCACGCG GGCACGACGCGCATCGCGGC
Downstream 100 bases:
>100_bases ACGTGGAACTTCGGCGACGTGACGACCGTCCCCGTGACCTTGCAGTCCGGCGCCAGAGCCGCGTTGCTGAAGGTGAGCGA CGAGTTCGCATCGGTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTRLPLSARSRCPRAAHAGVTACAAALASGDFPVARRLANAAAPGSRVLAMHVERLMIDEPPHVETVTNY
Sequences:
>Translated_70_residues MTRLPLSARSRCPRAAHAGVTACAAALASGDFPVARRLANAAAPGSRVLAMHVERLMIDEPPHVETVTNY >Mature_69_residues TRLPLSARSRCPRAAHAGVTACAAALASGDFPVARRLANAAAPGSRVLAMHVERLMIDEPPHVETVTNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7395; Mature: 7263
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLPLSARSRCPRAAHAGVTACAAALASGDFPVARRLANAAAPGSRVLAMHVERLMIDE CCCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC PPHVETVTNY CCCCCCCCCC >Mature Secondary Structure TRLPLSARSRCPRAAHAGVTACAAALASGDFPVARRLANAAAPGSRVLAMHVERLMIDE CCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC PPHVETVTNY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA