| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813539
Identifier: 237813539
GI number: 237813539
Start: 3198022
End: 3199236
Strand: Direct
Name: 237813539
Synonym: GBP346_A3315
Alternate gene names: NA
Gene position: 3198022-3199236 (Clockwise)
Preceding gene: 237813532
Following gene: 237813540
Centisome position: 78.03
GC content: 64.03
Gene sequence:
>1215_bases GTGGCGCTCGCCGCCGCGGCCGCTTCGATGTTCGGCGCGGGCCCCGCACATGCGACCGGCGTCGGCGCACCGCTCCAGAT CGACGTCTACAACCCCGGCGAAAAAAGCCTCTTTCCCGTCTCGTCCGAAATCGTCACGGGCAAGACCGGCACGATCCTCA TCGACGCCCAGTTCCAGCGCAACGACGCCGAGACGCTCGTCAACAAGATCAAGGCGACCGGCAAGCCGCTCAAGCTCGTC TATGTGAGCCACAGCGATCCGGACTATTACTTCGGCCTCGACACGATCAAGGCGGCGTTCCCCGACGCGAAGATCGTCGC GACGCCGCAGACGGTTGCCGCGATCAAGGCGAACAAGGACGACAAGCTCGCGTACTGGGGGCCGATCCTGAAGGACAATG CGCCGCGCACGCTCGTCGTGCCGCAGCCGCTCCACGGCGACAGGCTCACGCTCGACGGCCATGAATTGCGCATCGTCGGC CTCGACGGCCCGTCGCCCGATCGCACGTTCGTATCGATCCCGTCCGCGCGCGCGGTCGTCGGCGGCATTCCGGTGGCGGC GAACATCCACGTGTGGATCGCCGATACGCAAACGCCGGAGTCGCGCCGCAACTGGATCAAGACGCTCGACCGGATCGCGG CGCTGCACCCGTCGCGCGTCGTGCCCGGCCACTACCTCGCGAACCCGGACGGCAGCGAGCCGTACACGCTCGCATCCGTG AAGTTCACGCGCGACTATCTGGTCGCGTTCGACGCGGAAGCCGCGAAAGCGAGAAATTCCGGAGAACTGATCACTGCAAT GAAGGCGCGCTATCCGAATCTCGCGGATGCATCGTCGCTGGAAATGAGCGCGAAGGTCATCAAGGGCGAGATGCAATGGC CCGTCGTCGGCACGGCCTCCGCGTTTCCGGCAGCAGGCAAGAAGGCGCTCGTGCAGTTCGGCGATATCGGCTTTCGCCTC GACTTCAAGGACGACCACACGATGACGTTCGTCGGCACAGCCGGCCAGTACCAGGGCGCGACCGATACCGTCGAATACAA GGCAACGCAGATCCGGCCGCAGGTGTTCATGGTCTATTGGCACGAACCGAAGAGCGGCGACAACGTGGTGCACGTCGAAG ACTTCGAGAACGGCATCGTCTATACGAACATCGCGCATCGCAACGGCGAGTTCCAGCATCTGAAGGGAACGATTCGCATC GAAGACGCGAAGTAA
Upstream 100 bases:
>100_bases TTTCGACGACAACGCACCGCTTCGACGGCGCCTTGCTTGCTCGCGTCGCCAGACAACACCAAGACTTCTCAGGGAATCCT TCATGTTCTTACGCTCTCTC
Downstream 100 bases:
>100_bases GCCGGCACGCCCGTGGCCGCGCCGCTGTCGGCGGCGCGACTATTCGTCCGGCAGGGCGCGCTGGCGCACTCGGGGCGCGC CCCTCCCCGTTCGGGCCGCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Hypothethical Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAETLVNKIKATGKPLKLV YVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRIVG LDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLASV KFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDIGFRL DFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTIRI EDAK
Sequences:
>Translated_404_residues MALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAETLVNKIKATGKPLKLV YVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRIVG LDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLASV KFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDIGFRL DFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTIRI EDAK >Mature_403_residues ALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAETLVNKIKATGKPLKLVY VSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRIVGL DGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLASVK FTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDIGFRLD FKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTIRIE DAK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43746; Mature: 43615
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQR CCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECC NDAETLVNKIKATGKPLKLVYVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKD CCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHHCCCCCEEEECCCEEEEEECCCC DKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRIVGLDGPSPDRTFVSIPSARAVV CCEEEECCCCCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCEEEECCCCCEEE GGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLASV CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEEE KFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTAS EEEEEEEEEECCHHHCCCCCCCEEEEEHHCCCCCCCCCCHHEEEEEEECCCCCCEEECCC AFPAAGKKALVQFGDIGFRLDFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYW CCCCCCCCEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEE HEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTIRIEDAK ECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEECCC >Mature Secondary Structure ALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQR CHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEECC NDAETLVNKIKATGKPLKLVYVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKD CCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHHHHHHCCCCCEEEECCCEEEEEECCCC DKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRIVGLDGPSPDRTFVSIPSARAVV CCEEEECCCCCCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCCCCEEEECCCCCEEE GGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLASV CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCEEEEEE KFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTAS EEEEEEEEEECCHHHCCCCCCCEEEEEHHCCCCCCCCCCHHEEEEEEECCCCCCEEECCC AFPAAGKKALVQFGDIGFRLDFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYW CCCCCCCCEEEEECCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCEEEEEEE HEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTIRIEDAK ECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA