| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is ureE [H]
Identifier: 237813481
GI number: 237813481
Start: 3143103
End: 3143738
Strand: Direct
Name: ureE [H]
Synonym: GBP346_A3257
Alternate gene names: 237813481
Gene position: 3143103-3143738 (Clockwise)
Preceding gene: 237813480
Following gene: 237813482
Centisome position: 76.69
GC content: 70.13
Gene sequence:
>636_bases ATGCGCACGATCGACAAACGCATCGCCCCGAACGTGAGGCTCGCCGCCACGCTCGTCGCGCGCGCGCCCGCGCTCACGCT CGCCTACGACGCGCGCTGCAAGAGCCGGCTCGCCGCCACGCTCGACACGGGCGAGGACGTCGCGCTCGTGCTGCCGCGCG GCACCGTGTTGCGCGACGGCGACGTGCTCGTCGCCGACGACGGCGCGCTCGTGCGCGTGGCCGCCGCGCACGAAGCCGTG CTGCTCGTGCGCGCGCCCGACGCGCTCACGCTCACGCGCGCCGCGTATCACCTCGGCAACCGCCATACACCGGTTGAAGT CGGCGCCGGCTGCCTGAAGCTTGAATACGATCCCGTGCTCGCCGACATGCTCACGCGGCTCGGCGCGACGGTCGAGCGCG CGAGCGCGCCGTTCCAGCCCGAAGCCGGCGCGTACGGCGGCGGACATCGTCACGGGCACGATGCGACGTTCGCCGAGGAT TACGCGCTCGCGCAGCAGGTGTTCGACGAGCATCACGGCCACTCGCACTCGCACTCGCACTCGCACGATCACGATCACGA TCACGATCACGATCACGATCACGATCATCAGCATGGCCCGTGTTGCTCGAACGGTCATCACCATGGACACCGCTGA
Upstream 100 bases:
>100_bases ACGACGTCGTCGCCGACGGCGCGCTGCTCACCTGCGAGCCCGCCGCCGTGCTGCCGATGGCGCAACGCTACTTCCTGTTC TGAAGCCCTGACGAATCATC
Downstream 100 bases:
>100_bases GCTCGTCGCGCTGCTGCACCTCGCGTCGCCGGCGTTGCCGATCGGCGCGTTCAGCTATTCGCAGGGTCTCGAAGCCGCGC TCGACGCGCCGCTGATTCGC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRTIDKRIAPNVRLAATLVARAPALTLAYDARCKSRLAATLDTGEDVALVLPRGTVLRDGDVLVADDGALVRVAAAHEAV LLVRAPDALTLTRAAYHLGNRHTPVEVGAGCLKLEYDPVLADMLTRLGATVERASAPFQPEAGAYGGGHRHGHDATFAED YALAQQVFDEHHGHSHSHSHSHDHDHDHDHDHDHDHQHGPCCSNGHHHGHR
Sequences:
>Translated_211_residues MRTIDKRIAPNVRLAATLVARAPALTLAYDARCKSRLAATLDTGEDVALVLPRGTVLRDGDVLVADDGALVRVAAAHEAV LLVRAPDALTLTRAAYHLGNRHTPVEVGAGCLKLEYDPVLADMLTRLGATVERASAPFQPEAGAYGGGHRHGHDATFAED YALAQQVFDEHHGHSHSHSHSHDHDHDHDHDHDHDHQHGPCCSNGHHHGHR >Mature_211_residues MRTIDKRIAPNVRLAATLVARAPALTLAYDARCKSRLAATLDTGEDVALVLPRGTVLRDGDVLVADDGALVRVAAAHEAV LLVRAPDALTLTRAAYHLGNRHTPVEVGAGCLKLEYDPVLADMLTRLGATVERASAPFQPEAGAYGGGHRHGHDATFAED YALAQQVFDEHHGHSHSHSHSHDHDHDHDHDHDHDHQHGPCCSNGHHHGHR
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 22810; Mature: 22810
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIDKRIAPNVRLAATLVARAPALTLAYDARCKSRLAATLDTGEDVALVLPRGTVLRDG CCCCCHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCEEEECC DVLVADDGALVRVAAAHEAVLLVRAPDALTLTRAAYHLGNRHTPVEVGAGCLKLEYDPVL CEEEECCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCEEEEECCHHH ADMLTRLGATVERASAPFQPEAGAYGGGHRHGHDATFAEDYALAQQVFDEHHGHSHSHSH HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC SHDHDHDHDHDHDHDHQHGPCCSNGHHHGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTIDKRIAPNVRLAATLVARAPALTLAYDARCKSRLAATLDTGEDVALVLPRGTVLRDG CCCCCHHHCCCCHHHHHHHHHCCEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCEEEECC DVLVADDGALVRVAAAHEAVLLVRAPDALTLTRAAYHLGNRHTPVEVGAGCLKLEYDPVL CEEEECCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCEEEEECCHHH ADMLTRLGATVERASAPFQPEAGAYGGGHRHGHDATFAEDYALAQQVFDEHHGHSHSHSH HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC SHDHDHDHDHDHDHDHQHGPCCSNGHHHGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA