| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813443
Identifier: 237813443
GI number: 237813443
Start: 3111019
End: 3112155
Strand: Direct
Name: 237813443
Synonym: GBP346_A3218
Alternate gene names: NA
Gene position: 3111019-3112155 (Clockwise)
Preceding gene: 237813440
Following gene: 237813444
Centisome position: 75.9
GC content: 74.14
Gene sequence:
>1137_bases ATGTCCCTTTCCGCTACGCCCCGCATCGGCTTCATCGGCGCCGGCCGCTTGGCACGCTGCGTCGCCCGCCGCTTCGCGCG CGCCGGATATGACGTCGTCGCCGTCGCGAGCCGCTCGAGTGCGTCGGCCGCCGCGCTCGCCGCGCAAATCGACGCCGAGC GGGCCGCGCGCCAGGCCGGCTCGAATCCGGCACCGCATTCCGCACTGAATTCCGTACCGAATATCACCCCCGATGTCGCA GCGAACGGCGCGCCGAACGCGAGCTCGAAGACGGCTTCGAAGGTGCCCTCGAGTGCCGCCTCGCAGGCGGCCTCGAGCGT CGCCCCGGCGTCCGCACCCGACGCGGGCCGCAGCCGCGCGCGCTGCGCCGCGCTCGATTCGCCGCAGGCGGTCGTCGACG CCGCCGATCTGATCTTCGTCACCACGCCCGACGACGCGCTCGGCCGAATCGCCGCCGAGCTGCGCTTCGCGCCGGCACGC GCCGGTGAACAGGCGCTCGTGCATTGCAGCGGCGCGTCGGGCGTCGATTTGCTCGATCCCGCGCGCGCGCAAGGTGCGGC GACAGGCGGCTTCCATCCGCTCTACCTGTTCGGCGGCGACGACGCCGATCTCGCGCGCATCGACGGCTGCTCGGTGACGA TCGAGGCCGACGGCGCGCTGAAGGACGCGCTGATGGCGCTCGCCGCGGCGCTCGGCTGCCATCCGCTGTCGATCCCGGCG GGCGGCAGGATGCTCTATCACGCGGCCGCGAACTACGCGGCGAGCTTCGCGCTTTGCAATCTCGCCGAGTGCGTCGAACT GTGGCGCTCGCTCGGCTTCGCCGAGGACGACGCGCTGCGCGCGCTGCTGCCGATGCTCGCCGGCACGATCGAGACCGCGC GCGACAAGGGGCTCGCGAACGCGCTCGCGGGGCCCGTATCGCGCGGCGACGTCGGCATCGTCGAGCGGCAGCTCGCGCTG CTCGAATCGCGCGGCGGCGACCACGCGGCGTTCTACGCGTTCCACACCCGCCGCGCGGTCGCGCTCGCGCGCCGGCGCGC GTCGCCGCCGCCGTCGCTCGACGCGCTCGAGCGCGCGCTCGACGCATCGCTCGCCCGTTCGCTCGACCTCGCACGCCCCG CCTGCGACGAGCCGTGA
Upstream 100 bases:
>100_bases GCTCCGCCCCCATCATCGACGCGATTTTCGGGCCCGACCGAACGCCGCCGCGGCCGAATACGCGATACTGGCGGTTTACC GCAGATGACGGATCGCTTCC
Downstream 100 bases:
>100_bases TAAGGTGACGCCCGATGCACGCCGCCCGAAGGCGGCGCAGGCACGCTACCCGACTGGACTGGATAACGAAAAGGATTCAA AGATGTTCGGCGAGATCGCC
Product: NADP oxidoreductase, coenzyme f420-dependent
Products: NA
Alternate protein names: Cytoplasmic Protein; Pyrroline-5-Carboxylate Reductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain Protein; NADP Oxidoreductase; Oxidoreductase/Dehydrogenase Rossmann-Like Domain; Oxidoreductase; Oxidoreductase Domain-Containing Protein; Pantoate/Beta-Alanine Ligase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSLSATPRIGFIGAGRLARCVARRFARAGYDVVAVASRSSASAAALAAQIDAERAARQAGSNPAPHSALNSVPNITPDVA ANGAPNASSKTASKVPSSAASQAASSVAPASAPDAGRSRARCAALDSPQAVVDAADLIFVTTPDDALGRIAAELRFAPAR AGEQALVHCSGASGVDLLDPARAQGAATGGFHPLYLFGGDDADLARIDGCSVTIEADGALKDALMALAAALGCHPLSIPA GGRMLYHAAANYAASFALCNLAECVELWRSLGFAEDDALRALLPMLAGTIETARDKGLANALAGPVSRGDVGIVERQLAL LESRGGDHAAFYAFHTRRAVALARRRASPPPSLDALERALDASLARSLDLARPACDEP
Sequences:
>Translated_378_residues MSLSATPRIGFIGAGRLARCVARRFARAGYDVVAVASRSSASAAALAAQIDAERAARQAGSNPAPHSALNSVPNITPDVA ANGAPNASSKTASKVPSSAASQAASSVAPASAPDAGRSRARCAALDSPQAVVDAADLIFVTTPDDALGRIAAELRFAPAR AGEQALVHCSGASGVDLLDPARAQGAATGGFHPLYLFGGDDADLARIDGCSVTIEADGALKDALMALAAALGCHPLSIPA GGRMLYHAAANYAASFALCNLAECVELWRSLGFAEDDALRALLPMLAGTIETARDKGLANALAGPVSRGDVGIVERQLAL LESRGGDHAAFYAFHTRRAVALARRRASPPPSLDALERALDASLARSLDLARPACDEP >Mature_377_residues SLSATPRIGFIGAGRLARCVARRFARAGYDVVAVASRSSASAAALAAQIDAERAARQAGSNPAPHSALNSVPNITPDVAA NGAPNASSKTASKVPSSAASQAASSVAPASAPDAGRSRARCAALDSPQAVVDAADLIFVTTPDDALGRIAAELRFAPARA GEQALVHCSGASGVDLLDPARAQGAATGGFHPLYLFGGDDADLARIDGCSVTIEADGALKDALMALAAALGCHPLSIPAG GRMLYHAAANYAASFALCNLAECVELWRSLGFAEDDALRALLPMLAGTIETARDKGLANALAGPVSRGDVGIVERQLALL ESRGGDHAAFYAFHTRRAVALARRRASPPPSLDALERALDASLARSLDLARPACDEP
Specific function: Unknown
COG id: COG5495
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38401; Mature: 38270
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSATPRIGFIGAGRLARCVARRFARAGYDVVAVASRSSASAAALAAQIDAERAARQAG CCCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC SNPAPHSALNSVPNITPDVAANGAPNASSKTASKVPSSAASQAASSVAPASAPDAGRSRA CCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHH RCAALDSPQAVVDAADLIFVTTPDDALGRIAAELRFAPARAGEQALVHCSGASGVDLLDP HHHCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC ARAQGAATGGFHPLYLFGGDDADLARIDGCSVTIEADGALKDALMALAAALGCHPLSIPA HHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCC GGRMLYHAAANYAASFALCNLAECVELWRSLGFAEDDALRALLPMLAGTIETARDKGLAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAGPVSRGDVGIVERQLALLESRGGDHAAFYAFHTRRAVALARRRASPPPSLDALERAL HHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH DASLARSLDLARPACDEP HHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLSATPRIGFIGAGRLARCVARRFARAGYDVVAVASRSSASAAALAAQIDAERAARQAG CCCCCCCCEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC SNPAPHSALNSVPNITPDVAANGAPNASSKTASKVPSSAASQAASSVAPASAPDAGRSRA CCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHH RCAALDSPQAVVDAADLIFVTTPDDALGRIAAELRFAPARAGEQALVHCSGASGVDLLDP HHHCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC ARAQGAATGGFHPLYLFGGDDADLARIDGCSVTIEADGALKDALMALAAALGCHPLSIPA HHHCCCCCCCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCC GGRMLYHAAANYAASFALCNLAECVELWRSLGFAEDDALRALLPMLAGTIETARDKGLAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAGPVSRGDVGIVERQLALLESRGGDHAAFYAFHTRRAVALARRRASPPPSLDALERAL HHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH DASLARSLDLARPACDEP HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA