Click here to switch to the map view.

The map label for this gene is yggT [C]

Identifier: 237813444

GI number: 237813444

Start: 3112160

End: 3112801

Strand: Direct

Name: yggT [C]

Synonym: GBP346_A3219

Alternate gene names: 237813444

Gene position: 3112160-3112801 (Clockwise)

Preceding gene: 237813443

Following gene: 237813447

Centisome position: 75.93

GC content: 65.89

Gene sequence:

>642_bases
GTGACGCCCGATGCACGCCGCCCGAAGGCGGCGCAGGCACGCTACCCGACTGGACTGGATAACGAAAAGGATTCAAAGAT
GTTCGGCGAGATCGCCCGTTTTCTGCTCAATACCGTGTTCACGCTGTTCGGCGCCGCATTGCTCCTGCGCGTCTGGCTGC
AGGCCGTGCGCGTGCCGCCGTACAACCCCGTCACGCAGGCCGTGCTGCAGGCGACCAACTGGCTCGTGCTGCCGCTGCGG
CACATCGTCCCGGGCGTGCGCGGCATCGATTGGGCGAGCGTCGTCGCGGCCGTCGTCACGTCGCTCGTCTACGTCGCGCT
GATGGTGACGATGGCGGGCGTCGACGCGCTGTCGATCATCCCGACGATCCTCGTCGTCGCGCTGCTGACCGTCGTCAAGT
GGGCGCTCAATCTGGTGCTGTGGCTCACGATCCTGATGGCGCTGCTGTCGTGGCTGAACCCGCGCTCGCCCGCGATGGCG
ATCCTGTATCAGCTGACGGCGCCGTTGCTGAACCCGCTGCGCCGGCTGATCCCGAATCTGGGCGGCATCGATCTGTCGCC
GATCCTGCTGTTCGTGATCGTTCAGGTGCTGATCATGATCGTCACGCGCGCGGCGGTGTCGCTCACGCTGTTCGGCATCT
GA

Upstream 100 bases:

>100_bases
TCGCCGCCGCCGTCGCTCGACGCGCTCGAGCGCGCGCTCGACGCATCGCTCGCCCGTTCGCTCGACCTCGCACGCCCCGC
CTGCGACGAGCCGTGATAAG

Downstream 100 bases:

>100_bases
TCCGGCCGGCGGCGGCACCCGCGCTATGCCGCGGGCGGCGCGGCGCCCGGCGCGCCGTCGCCGAGATTGTCGATCACGCC
GAGGCGCGCCGGGATCGTCG

Product: membrane protein, yggt family

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTPDARRPKAAQARYPTGLDNEKDSKMFGEIARFLLNTVFTLFGAALLLRVWLQAVRVPPYNPVTQAVLQATNWLVLPLR
HIVPGVRGIDWASVVAAVVTSLVYVALMVTMAGVDALSIIPTILVVALLTVVKWALNLVLWLTILMALLSWLNPRSPAMA
ILYQLTAPLLNPLRRLIPNLGGIDLSPILLFVIVQVLIMIVTRAAVSLTLFGI

Sequences:

>Translated_213_residues
MTPDARRPKAAQARYPTGLDNEKDSKMFGEIARFLLNTVFTLFGAALLLRVWLQAVRVPPYNPVTQAVLQATNWLVLPLR
HIVPGVRGIDWASVVAAVVTSLVYVALMVTMAGVDALSIIPTILVVALLTVVKWALNLVLWLTILMALLSWLNPRSPAMA
ILYQLTAPLLNPLRRLIPNLGGIDLSPILLFVIVQVLIMIVTRAAVSLTLFGI
>Mature_212_residues
TPDARRPKAAQARYPTGLDNEKDSKMFGEIARFLLNTVFTLFGAALLLRVWLQAVRVPPYNPVTQAVLQATNWLVLPLRH
IVPGVRGIDWASVVAAVVTSLVYVALMVTMAGVDALSIIPTILVVALLTVVKWALNLVLWLTILMALLSWLNPRSPAMAI
LYQLTAPLLNPLRRLIPNLGGIDLSPILLFVIVQVLIMIVTRAAVSLTLFGI

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yggT family [H]

Homologues:

Organism=Escherichia coli, GI1789322, Length=167, Percent_Identity=37.125748502994, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003425 [H]

Pfam domain/function: PF02325 YGGT [H]

EC number: NA

Molecular weight: Translated: 23320; Mature: 23188

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDARRPKAAQARYPTGLDNEKDSKMFGEIARFLLNTVFTLFGAALLLRVWLQAVRVPP
CCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YNPVTQAVLQATNWLVLPLRHIVPGVRGIDWASVVAAVVTSLVYVALMVTMAGVDALSII
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTILVVALLTVVKWALNLVLWLTILMALLSWLNPRSPAMAILYQLTAPLLNPLRRLIPNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GGIDLSPILLFVIVQVLIMIVTRAAVSLTLFGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPDARRPKAAQARYPTGLDNEKDSKMFGEIARFLLNTVFTLFGAALLLRVWLQAVRVPP
CCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YNPVTQAVLQATNWLVLPLRHIVPGVRGIDWASVVAAVVTSLVYVALMVTMAGVDALSII
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTILVVALLTVVKWALNLVLWLTILMALLSWLNPRSPAMAILYQLTAPLLNPLRRLIPNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
GGIDLSPILLFVIVQVLIMIVTRAAVSLTLFGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8982386 [H]