| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813252
Identifier: 237813252
GI number: 237813252
Start: 2935291
End: 2935623
Strand: Reverse
Name: 237813252
Synonym: GBP346_A3019
Alternate gene names: NA
Gene position: 2935623-2935291 (Counterclockwise)
Preceding gene: 237813253
Following gene: 237813249
Centisome position: 71.63
GC content: 75.38
Gene sequence:
>333_bases ATGTCACGCGCATCGCCCGAACCCCTTCGCCCGCTTGCCGAAGCCGATGCTTTCGCGATCGCCGACGCGCATGCGGCCCG CCGCGAACCGCATCGGCCGCTCGGACAATACGCGCGGCCCGGCGTCGCCGGCATGCGCCGGGCGTCGACGCCCGCCGTGG CATCGTCGGCGCGATCGGCGCGCACCGGCACGCGCGGCGCGGCGGTGCGCCATCGCGCGTGCGTCGCGCCGGCCGTAACG CGTCGCCGTGCCGCGGCGAACGTGGAACAGGTTGCCGGCGCAAGCTTCACCGCTTCGGCGAGCGGGCGTTGCAGCGCACC GGGGCATGCATGA
Upstream 100 bases:
>100_bases CGTTTCGATGATGCCGATTGCGCCGGCCGTAACGCGCCCGGCGCTCGCCGGCCTCGCATGAAGAAGATTCGCGGCGATGC GGCTTGCCGCAGGGCCGCCG
Downstream 100 bases:
>100_bases ATTCCGCTTTCAAAAAGAGTGCCCGCCGGGGGACGGAGCACCAAAACGTTTGCCGTTGCACGAACGGCTCCGGCTATCTG GACGACCTGGACGATTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVT RRRAAANVEQVAGASFTASASGRCSAPGHA
Sequences:
>Translated_110_residues MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVT RRRAAANVEQVAGASFTASASGRCSAPGHA >Mature_109_residues SRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSARTGTRGAAVRHRACVAPAVTR RRAAANVEQVAGASFTASASGRCSAPGHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11251; Mature: 11120
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSA CCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHH RTGTRGAAVRHRACVAPAVTRRRAAANVEQVAGASFTASASGRCSAPGHA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRASPEPLRPLAEADAFAIADAHAARREPHRPLGQYARPGVAGMRRASTPAVASSARSA CCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCHHHHHHHHH RTGTRGAAVRHRACVAPAVTRRRAAANVEQVAGASFTASASGRCSAPGHA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA