| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813253
Identifier: 237813253
GI number: 237813253
Start: 2935663
End: 2936370
Strand: Reverse
Name: 237813253
Synonym: GBP346_A3020
Alternate gene names: NA
Gene position: 2936370-2935663 (Counterclockwise)
Preceding gene: 237813256
Following gene: 237813252
Centisome position: 71.64
GC content: 74.15
Gene sequence:
>708_bases GTGGGCGCGCCGGCGCGCGCCGCGGGCGTCGTTGCCGCGCAGGGTGCGGCCGATGCGAGTTGGGCGACTGGTGGGGGCGA CGCGACCGACGCGACCGACGCGACCGATGCGACCGACGCGACCGACGCGACCGACGCGACCGACGCGACCGACGCGATCG ATGCGACCGATGCGACCGATGCGACCGATGCGACCGATGCGACCGACGCATCCGACGCGACTGGGCGGCGAGGAAGTCGT TCGGCGAGCGAGCCGCGCCGGCGTCGCGGCGATGCGTGGGCAATCGTTCGGGGGACGGACGTGCGCGCGACGATGCATGC GGCGCGCATTGCGCGGCGCACGGGAAACATCGGCCTGTCGGCGGCGCCATGCCGCTCGCCGCCACGGCGCGCCGCCGCGA TCCGCGCGGTTCGGCCGGACGTCGATGCGGCGAACGCACGCGCGTCGCGCGCCGCGCGCGAATGCGGCGGCGGGCCGAGT GCGCGTCGGCGCGATTTCCCCGGACATGTGGTCCCCCCGTTGCGCGTCGTGCCGCCGATTGCGGCGATGCAATGCGCGTT CCCCGTTAAAAAGCCGTCGACGGCAATGCTTCAGCGCGGCGACGGCGAGTGGTTGTCCTGCCTCGAGCCGGCATTGCCGG CGGCCTTCGTTTCGATGATGCCGATTGCGCCGGCCGTAACGCGCCCGGCGCTCGCCGGCCTCGCATGA
Upstream 100 bases:
>100_bases CGGCGCGCAATCGGAAGGGGGGCGGAAGTCTGGCACGATGCACCTCAGCTGGGATGTTGTTCGGAACGTGTCGGGGCGAG CGCGGCGAGCGGAGTTCGAG
Downstream 100 bases:
>100_bases AGAAGATTCGCGGCGATGCGGCTTGCCGCAGGGCCGCCGATGTCACGCGCATCGCCCGAACCCCTTCGCCCGCTTGCCGA AGCCGATGCTTTCGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGAPARAAGVVAAQGAADASWATGGGDATDATDATDATDATDATDATDATDAIDATDATDATDATDATDASDATGRRGSR SASEPRRRRGDAWAIVRGTDVRATMHAARIARRTGNIGLSAAPCRSPPRRAAAIRAVRPDVDAANARASRAARECGGGPS ARRRDFPGHVVPPLRVVPPIAAMQCAFPVKKPSTAMLQRGDGEWLSCLEPALPAAFVSMMPIAPAVTRPALAGLA
Sequences:
>Translated_235_residues MGAPARAAGVVAAQGAADASWATGGGDATDATDATDATDATDATDATDATDAIDATDATDATDATDATDASDATGRRGSR SASEPRRRRGDAWAIVRGTDVRATMHAARIARRTGNIGLSAAPCRSPPRRAAAIRAVRPDVDAANARASRAARECGGGPS ARRRDFPGHVVPPLRVVPPIAAMQCAFPVKKPSTAMLQRGDGEWLSCLEPALPAAFVSMMPIAPAVTRPALAGLA >Mature_234_residues GAPARAAGVVAAQGAADASWATGGGDATDATDATDATDATDATDATDATDAIDATDATDATDATDATDASDATGRRGSRS ASEPRRRRGDAWAIVRGTDVRATMHAARIARRTGNIGLSAAPCRSPPRRAAAIRAVRPDVDAANARASRAARECGGGPSA RRRDFPGHVVPPLRVVPPIAAMQCAFPVKKPSTAMLQRGDGEWLSCLEPALPAAFVSMMPIAPAVTRPALAGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23847; Mature: 23715
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPARAAGVVAAQGAADASWATGGGDATDATDATDATDATDATDATDATDAIDATDATD CCCCCCHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC ATDATDATDASDATGRRGSRSASEPRRRRGDAWAIVRGTDVRATMHAARIARRTGNIGLS CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC AAPCRSPPRRAAAIRAVRPDVDAANARASRAARECGGGPSARRRDFPGHVVPPLRVVPPI CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCH AAMQCAFPVKKPSTAMLQRGDGEWLSCLEPALPAAFVSMMPIAPAVTRPALAGLA HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure GAPARAAGVVAAQGAADASWATGGGDATDATDATDATDATDATDATDATDAIDATDATD CCCCCHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC ATDATDATDASDATGRRGSRSASEPRRRRGDAWAIVRGTDVRATMHAARIARRTGNIGLS CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCC AAPCRSPPRRAAAIRAVRPDVDAANARASRAARECGGGPSARRRDFPGHVVPPLRVVPPI CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCH AAMQCAFPVKKPSTAMLQRGDGEWLSCLEPALPAAFVSMMPIAPAVTRPALAGLA HHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA