| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813245
Identifier: 237813245
GI number: 237813245
Start: 2928539
End: 2931112
Strand: Direct
Name: 237813245
Synonym: GBP346_A3012
Alternate gene names: NA
Gene position: 2928539-2931112 (Clockwise)
Preceding gene: 237813244
Following gene: 237813248
Centisome position: 71.45
GC content: 74.51
Gene sequence:
>2574_bases ATGCTTGCCACTCGCCATCCATTCGCGCTCACACGCATCGCCCGCCATACGCTCGTCGCCGTCGCGATGCTCGCCGCGCT GCCGCCCGCCATCGCGCAAAACGTCGCGCCGCCGCCCGCCGGTGTCGCCCGGCAAACGGGCGGCGATCCGCCGAGCCGCG TCGCGCGCCTGAACTACCTGTCGGGCGCGGTGACGACCGAGCCCGCGGGCGCGAGCGACTGGTCGTACGCAGCCGTCAAC CGCCCGCTCACGACGGGCGACCAGCTCTGGAACGATTCGGGCGCGCGCTCCGAGCTGCACATCGGCTCGACCGCGGTGCG GCTCGGCCAGTCGACGAGCCTGTCGATCCTCAATCTCGACGATGCGAACACGCAGTTGAAGGTGCCGCTCGGCACGCTGT CGACGCATGTGCGCGAGCTGCCGCCCGGCACGTCGTATGAAATCGACACGCCGAACCTCGCGCTCGCGGTCGGCGCGCCC GGCGACTATCGTGTCGACGTCGCGCCCGACGGCTCGAGCACGACCGTCACCGTGCGGCGCGGCAGCGCGACCGTCTACGG CGACGGCACGCAGATGCCGGTGTCGGCCGGCCAGCGGGTCGTCTTCACGGGCACCGCGCTACAGGTCGCGGACACGGGCG CCGTGCCGCCGCCCGACGGCCTCGACGAGTGGGTGGCGAGCCGCGACGCGGCCGAGGAGCGCTCGGTGTCGGCGCGCTAC GTGTCGCGCGAAATCCCCGGCTACCAGGATCTCGATGCGAACGGAACGTGGCGGGAGAACCCCGACTACGGCGAAGTATG GGTGCCGAGCGCGGTGCCCGCCGGCTGGGCGCCGTACCGCACCGGCCACTGGATCTGGCAGGCGCCGTGGGGCTGGACCT GGGTCGACGACGAGCCGTGGGGCTTCGCACCGTACCATTACGGCCGCTGGGCGTACGTCGACGATTCGTGGGCCTGGGTG CCGGGCCCGCTCGTCGTCAGCGCGCCGCCCTGCTACGCGCCCGCGCTCGTCGCGTTCGTCGGCGGAGGCGGCGGCGGCTT CGACTGGAGCGTGGGCCTCGCGATCGGCGGCATCGCGGCGGCGGGCGTGGCGTGGTTCCCGCTCGGCCCGCGCGACCCAT GGCGGCCGAGCTGGGGCGGCTGGAGCCCGCACTATTACCAGCACGTGAACCAGACCGTGATCGTGAACAACGTCAACAAC ATCAACGTCAACAAGACGGTGAACGTGACGAACATCACGAACATCACGAACATTCACAACACGTACGTGAACTTCCGCGC GCCGAACGCGGTGACCGCCGTGCCGGCCACCGCGTTCGTCCACGGTCAGCCGGTGTCGCGCTTCGCGCAAAAGGTCGATC CGCAGCAGTGGCGCAACGCGCACATCGGCTCGGGCGCGCCGGGCGTGGCGCCGGTGCGGCAAAGCTTCACCGGCGCGCTG CGCAACGCCGCGTACCGGCCGCCCGCGGCCGTCGCGCAACGCTCGATCGTCGCCACGCGCAACCCGGCCGTGCCGGCGGC CTACCACGATCAACTCGCCGCGCACCTCGCGCAAAGCGGCGCGCGAGTGCCCGGCGCGGGCGCGCCCGTCGTGAAGACCG CCGTGCCGCCGAACTATGCGATGCGGCCGGTGCGTACGCCGGAAAACACGGGCGCACCGAACCGCTGGGCGATGCGCAAC GTGCAGCTCGTCGACACGCGCTCGAGCGTCGCGCAACCCGAGCGCGCCCCGCAGGCCGGCGCGGGCAATCCGGCCGCGCG CGCAGGCGAACGGCCGCAGCCGAACATGCCGCAGCCGAACGCGGCTCAGCCGAATGCCGCGCAGCCAAACATCGCGCGCC CCGGCCAGCCGCAGCCGGGCGTCGCGCAGCCGACTGCGCCGCACGCGCCGGGCACGCCGCCAAACGCGATGCGGCCCGAC GCGGCCCGGCCGAACGAGGCCCGACCGGCTCCCGCGCCGTCGGCCCGCAACGGCGTGCCGCGGCCGCCCGCCGCCGTCGA GAACCCGGGCATGCGCGACGAAGCGCGTGCGCCGGGCGAAGCGCCGCGTCCGCAGCCGTCCTGGACGCAGCCGCATCCGC CGATCCAGCAGCAGCGCGCGAACGAAGGCGGGCCACGCGCGAGCGGCGAGCCGAATGCGCCGCTCAATTACCGGTCGCCC ACGCAGAACGCGCTGCCGCCGATTCGCTCGACGCCGACGCCCACGCACTCCGCCCCGCCCGCGCCGCCGCCCGCCGAGCG TGCGCAGCCGCAGCCGCAGCCGGGGCCGGCGCCCCGAAACGCAATGCGTGCGCCCGAAGCGCCGCGCCAGGAAGTCGCGC CGCCCGCGCCGCGCAACGAATATCGCGCGCCGGCCCCCGCGCCGCGTCCGCAGATCGAAGCGCCGAGGATGGAAGCGCCG CGCATGCCCGCGCCGCGCGCTGAAGCGCCGAGGATGGAGCCGCGCCCCGCCCCGCCGCCGCCCGCCGTGCCGCACAATCC ACCGCCCGCGCCGCGCCAGGAGCCGCCGCATCAGGCGCGCCCCGATCAGCAGCACGGTTTCGCCCCTCGCCGCGAAGAGC GCCGGCACGCGTAG
Upstream 100 bases:
>100_bases AAATCGCATAACAAAACCATCGTCACTGAAACATGCCGAGCGGATAGAGTGGACTCATACGGCGCTTGCCACGCCGGACA AGACAGAGACAACGATGACC
Downstream 100 bases:
>100_bases CCGCGTCACACGCGTCGATCGACGCAAACGAAAAAACCCGCGAATTCGCGGGTTTTTTCTTGGGTCGGTCGAAACGGGCC GCGCGTCGTTCAAACGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Prolin-Rich Exported Protein; Proline-Rich Transmembrane Protein; Chromosome Segregation ATPase; Proline-Rich Exported Protein; Chromosome Segregation ATPases; Secreted Protein
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MLATRHPFALTRIARHTLVAVAMLAALPPAIAQNVAPPPAGVARQTGGDPPSRVARLNYLSGAVTTEPAGASDWSYAAVN RPLTTGDQLWNDSGARSELHIGSTAVRLGQSTSLSILNLDDANTQLKVPLGTLSTHVRELPPGTSYEIDTPNLALAVGAP GDYRVDVAPDGSSTTVTVRRGSATVYGDGTQMPVSAGQRVVFTGTALQVADTGAVPPPDGLDEWVASRDAAEERSVSARY VSREIPGYQDLDANGTWRENPDYGEVWVPSAVPAGWAPYRTGHWIWQAPWGWTWVDDEPWGFAPYHYGRWAYVDDSWAWV PGPLVVSAPPCYAPALVAFVGGGGGGFDWSVGLAIGGIAAAGVAWFPLGPRDPWRPSWGGWSPHYYQHVNQTVIVNNVNN INVNKTVNVTNITNITNIHNTYVNFRAPNAVTAVPATAFVHGQPVSRFAQKVDPQQWRNAHIGSGAPGVAPVRQSFTGAL RNAAYRPPAAVAQRSIVATRNPAVPAAYHDQLAAHLAQSGARVPGAGAPVVKTAVPPNYAMRPVRTPENTGAPNRWAMRN VQLVDTRSSVAQPERAPQAGAGNPAARAGERPQPNMPQPNAAQPNAAQPNIARPGQPQPGVAQPTAPHAPGTPPNAMRPD AARPNEARPAPAPSARNGVPRPPAAVENPGMRDEARAPGEAPRPQPSWTQPHPPIQQQRANEGGPRASGEPNAPLNYRSP TQNALPPIRSTPTPTHSAPPAPPPAERAQPQPQPGPAPRNAMRAPEAPRQEVAPPAPRNEYRAPAPAPRPQIEAPRMEAP RMPAPRAEAPRMEPRPAPPPPAVPHNPPPAPRQEPPHQARPDQQHGFAPRREERRHA
Sequences:
>Translated_857_residues MLATRHPFALTRIARHTLVAVAMLAALPPAIAQNVAPPPAGVARQTGGDPPSRVARLNYLSGAVTTEPAGASDWSYAAVN RPLTTGDQLWNDSGARSELHIGSTAVRLGQSTSLSILNLDDANTQLKVPLGTLSTHVRELPPGTSYEIDTPNLALAVGAP GDYRVDVAPDGSSTTVTVRRGSATVYGDGTQMPVSAGQRVVFTGTALQVADTGAVPPPDGLDEWVASRDAAEERSVSARY VSREIPGYQDLDANGTWRENPDYGEVWVPSAVPAGWAPYRTGHWIWQAPWGWTWVDDEPWGFAPYHYGRWAYVDDSWAWV PGPLVVSAPPCYAPALVAFVGGGGGGFDWSVGLAIGGIAAAGVAWFPLGPRDPWRPSWGGWSPHYYQHVNQTVIVNNVNN INVNKTVNVTNITNITNIHNTYVNFRAPNAVTAVPATAFVHGQPVSRFAQKVDPQQWRNAHIGSGAPGVAPVRQSFTGAL RNAAYRPPAAVAQRSIVATRNPAVPAAYHDQLAAHLAQSGARVPGAGAPVVKTAVPPNYAMRPVRTPENTGAPNRWAMRN VQLVDTRSSVAQPERAPQAGAGNPAARAGERPQPNMPQPNAAQPNAAQPNIARPGQPQPGVAQPTAPHAPGTPPNAMRPD AARPNEARPAPAPSARNGVPRPPAAVENPGMRDEARAPGEAPRPQPSWTQPHPPIQQQRANEGGPRASGEPNAPLNYRSP TQNALPPIRSTPTPTHSAPPAPPPAERAQPQPQPGPAPRNAMRAPEAPRQEVAPPAPRNEYRAPAPAPRPQIEAPRMEAP RMPAPRAEAPRMEPRPAPPPPAVPHNPPPAPRQEPPHQARPDQQHGFAPRREERRHA >Mature_857_residues MLATRHPFALTRIARHTLVAVAMLAALPPAIAQNVAPPPAGVARQTGGDPPSRVARLNYLSGAVTTEPAGASDWSYAAVN RPLTTGDQLWNDSGARSELHIGSTAVRLGQSTSLSILNLDDANTQLKVPLGTLSTHVRELPPGTSYEIDTPNLALAVGAP GDYRVDVAPDGSSTTVTVRRGSATVYGDGTQMPVSAGQRVVFTGTALQVADTGAVPPPDGLDEWVASRDAAEERSVSARY VSREIPGYQDLDANGTWRENPDYGEVWVPSAVPAGWAPYRTGHWIWQAPWGWTWVDDEPWGFAPYHYGRWAYVDDSWAWV PGPLVVSAPPCYAPALVAFVGGGGGGFDWSVGLAIGGIAAAGVAWFPLGPRDPWRPSWGGWSPHYYQHVNQTVIVNNVNN INVNKTVNVTNITNITNIHNTYVNFRAPNAVTAVPATAFVHGQPVSRFAQKVDPQQWRNAHIGSGAPGVAPVRQSFTGAL RNAAYRPPAAVAQRSIVATRNPAVPAAYHDQLAAHLAQSGARVPGAGAPVVKTAVPPNYAMRPVRTPENTGAPNRWAMRN VQLVDTRSSVAQPERAPQAGAGNPAARAGERPQPNMPQPNAAQPNAAQPNIARPGQPQPGVAQPTAPHAPGTPPNAMRPD AARPNEARPAPAPSARNGVPRPPAAVENPGMRDEARAPGEAPRPQPSWTQPHPPIQQQRANEGGPRASGEPNAPLNYRSP TQNALPPIRSTPTPTHSAPPAPPPAERAQPQPQPGPAPRNAMRAPEAPRQEVAPPAPRNEYRAPAPAPRPQIEAPRMEAP RMPAPRAEAPRMEPRPAPPPPAVPHNPPPAPRQEPPHQARPDQQHGFAPRREERRHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91098; Mature: 91098
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATRHPFALTRIARHTLVAVAMLAALPPAIAQNVAPPPAGVARQTGGDPPSRVARLNYL CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHH SGAVTTEPAGASDWSYAAVNRPLTTGDQLWNDSGARSELHIGSTAVRLGQSTSLSILNLD CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEC DANTQLKVPLGTLSTHVRELPPGTSYEIDTPNLALAVGAPGDYRVDVAPDGSSTTVTVRR CCCCEEEEEHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCCCEEEEEC GSATVYGDGTQMPVSAGQRVVFTGTALQVADTGAVPPPDGLDEWVASRDAAEERSVSARY CCEEEEECCCCCCHHHCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSREIPGYQDLDANGTWRENPDYGEVWVPSAVPAGWAPYRTGHWIWQAPWGWTWVDDEPW HHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEECCCCCC GFAPYHYGRWAYVDDSWAWVPGPLVVSAPPCYAPALVAFVGGGGGGFDWSVGLAIGGIAA CCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHCEEHEEECCCCCCCCEEHHHHHHHHHH AGVAWFPLGPRDPWRPSWGGWSPHYYQHVNQTVIVNNVNNINVNKTVNVTNITNITNIHN HCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCEECCCCEEEEEECCCCCCCCE TYVNFRAPNAVTAVPATAFVHGQPVSRFAQKVDPQQWRNAHIGSGAPGVAPVRQSFTGAL EEEEEECCCCEEECCCEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHH RNAAYRPPAAVAQRSIVATRNPAVPAAYHDQLAAHLAQSGARVPGAGAPVVKTAVPPNYA HHCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC MRPVRTPENTGAPNRWAMRNVQLVDTRSSVAQPERAPQAGAGNPAARAGERPQPNMPQPN CCCCCCCCCCCCCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC AAQPNAAQPNIARPGQPQPGVAQPTAPHAPGTPPNAMRPDAARPNEARPAPAPSARNGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPAAVENPGMRDEARAPGEAPRPQPSWTQPHPPIQQQRANEGGPRASGEPNAPLNYRSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC TQNALPPIRSTPTPTHSAPPAPPPAERAQPQPQPGPAPRNAMRAPEAPRQEVAPPAPRNE CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCHHHCCCCCCCCC YRAPAPAPRPQIEAPRMEAPRMPAPRAEAPRMEPRPAPPPPAVPHNPPPAPRQEPPHQAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDQQHGFAPRREERRHA CCHHHCCCCCHHHHCCC >Mature Secondary Structure MLATRHPFALTRIARHTLVAVAMLAALPPAIAQNVAPPPAGVARQTGGDPPSRVARLNYL CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHH SGAVTTEPAGASDWSYAAVNRPLTTGDQLWNDSGARSELHIGSTAVRLGQSTSLSILNLD CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEC DANTQLKVPLGTLSTHVRELPPGTSYEIDTPNLALAVGAPGDYRVDVAPDGSSTTVTVRR CCCCEEEEEHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCCCEEEEEC GSATVYGDGTQMPVSAGQRVVFTGTALQVADTGAVPPPDGLDEWVASRDAAEERSVSARY CCEEEEECCCCCCHHHCCEEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSREIPGYQDLDANGTWRENPDYGEVWVPSAVPAGWAPYRTGHWIWQAPWGWTWVDDEPW HHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEECCCCCC GFAPYHYGRWAYVDDSWAWVPGPLVVSAPPCYAPALVAFVGGGGGGFDWSVGLAIGGIAA CCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHCEEHEEECCCCCCCCEEHHHHHHHHHH AGVAWFPLGPRDPWRPSWGGWSPHYYQHVNQTVIVNNVNNINVNKTVNVTNITNITNIHN HCEEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCEECCCCEEEEEECCCCCCCCE TYVNFRAPNAVTAVPATAFVHGQPVSRFAQKVDPQQWRNAHIGSGAPGVAPVRQSFTGAL EEEEEECCCCEEECCCEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHH RNAAYRPPAAVAQRSIVATRNPAVPAAYHDQLAAHLAQSGARVPGAGAPVVKTAVPPNYA HHCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC MRPVRTPENTGAPNRWAMRNVQLVDTRSSVAQPERAPQAGAGNPAARAGERPQPNMPQPN CCCCCCCCCCCCCCHHHCCCEEEEECHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC AAQPNAAQPNIARPGQPQPGVAQPTAPHAPGTPPNAMRPDAARPNEARPAPAPSARNGVP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPPAAVENPGMRDEARAPGEAPRPQPSWTQPHPPIQQQRANEGGPRASGEPNAPLNYRSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCC TQNALPPIRSTPTPTHSAPPAPPPAERAQPQPQPGPAPRNAMRAPEAPRQEVAPPAPRNE CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCHHHCCCCCCCCC YRAPAPAPRPQIEAPRMEAPRMPAPRAEAPRMEPRPAPPPPAVPHNPPPAPRQEPPHQAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDQQHGFAPRREERRHA CCHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA