| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813235
Identifier: 237813235
GI number: 237813235
Start: 2921151
End: 2921657
Strand: Reverse
Name: 237813235
Synonym: GBP346_A3002
Alternate gene names: NA
Gene position: 2921657-2921151 (Counterclockwise)
Preceding gene: 237813236
Following gene: 237813229
Centisome position: 71.28
GC content: 73.57
Gene sequence:
>507_bases ATGTCCAAGATTCGTGCAATGCTGATCGGTGCCGCGGTGGCGGCGATGGCGACGAGCGCTTTCGCGCAGACGGGCGGCGT GGCGACGCAAGGTTCGGCCGGCGGCTCGGCCGACGTGCTCGGCCAGAAGGCCGGCGCGAGCGCGCAACTGAACGCGGGCG GCGACGTGTCGGCTGCGTCGCCGGAAGCGGCGGAGAACGCCGTCAAGCATTCGGCGAAGAAGCACGTGAAGCACGCGAAG GCCCAGGCGAAGGCGAAGGCCGACGAAGCGGCCGAACTCGGCGCGGACGCGAAGACGAAGGCGAGCGGTGCGATCGAGGG CGCGGCGGGCACGGCGGGCAACGCCGTCGGCGGCGTGACGAACGCGGCGGGCAACGTGGTCGGCGGTGCGACGAATGCGG TCGGCGGCGTCGCGGGCGCGGCGGGCGGTCTCGCGAAGGGCGTCGCGGGCGGCGCGAACGGCTCGGTGTCCGTCAACGGC GGCATGAAGGCCGGCGCGGGCGAGTAA
Upstream 100 bases:
>100_bases CTGGTCTGTACACGGACTCGCTGCATGTCGCGGCGAGCCCATAGCGGCGGGCCGGTTCGAAGGCGCGCCGTGTCCAACGA CTTTGTTGAGGAGAATTGCG
Downstream 100 bases:
>100_bases GCGCGGCTGGCGCGGCGCGCGGACGGTTCGCCCCGGAAGGCCCGTTCGACGCGCCGCGCTCAGGCTGAAGAACGACGGCC CGGATCGCATCGTGCGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSKIRAMLIGAAVAAMATSAFAQTGGVATQGSAGGSADVLGQKAGASAQLNAGGDVSAASPEAAENAVKHSAKKHVKHAK AQAKAKADEAAELGADAKTKASGAIEGAAGTAGNAVGGVTNAAGNVVGGATNAVGGVAGAAGGLAKGVAGGANGSVSVNG GMKAGAGE
Sequences:
>Translated_168_residues MSKIRAMLIGAAVAAMATSAFAQTGGVATQGSAGGSADVLGQKAGASAQLNAGGDVSAASPEAAENAVKHSAKKHVKHAK AQAKAKADEAAELGADAKTKASGAIEGAAGTAGNAVGGVTNAAGNVVGGATNAVGGVAGAAGGLAKGVAGGANGSVSVNG GMKAGAGE >Mature_167_residues SKIRAMLIGAAVAAMATSAFAQTGGVATQGSAGGSADVLGQKAGASAQLNAGGDVSAASPEAAENAVKHSAKKHVKHAKA QAKAKADEAAELGADAKTKASGAIEGAAGTAGNAVGGVTNAAGNVVGGATNAVGGVAGAAGGLAKGVAGGANGSVSVNGG MKAGAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15162; Mature: 15031
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRAMLIGAAVAAMATSAFAQTGGVATQGSAGGSADVLGQKAGASAQLNAGGDVSAAS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCC PEAAENAVKHSAKKHVKHAKAQAKAKADEAAELGADAKTKASGAIEGAAGTAGNAVGGVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAGNVVGGATNAVGGVAGAAGGLAKGVAGGANGSVSVNGGMKAGAGE CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure SKIRAMLIGAAVAAMATSAFAQTGGVATQGSAGGSADVLGQKAGASAQLNAGGDVSAAS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCC PEAAENAVKHSAKKHVKHAKAQAKAKADEAAELGADAKTKASGAIEGAAGTAGNAVGGVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NAAGNVVGGATNAVGGVAGAAGGLAKGVAGGANGSVSVNGGMKAGAGE CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA