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The map label for this gene is ytsP [H]

Identifier: 237813182

GI number: 237813182

Start: 2869715

End: 2870323

Strand: Direct

Name: ytsP [H]

Synonym: GBP346_A2944

Alternate gene names: 237813182

Gene position: 2869715-2870323 (Clockwise)

Preceding gene: 237813181

Following gene: 237813186

Centisome position: 70.02

GC content: 67.32

Gene sequence:

>609_bases
ATGCGGCGACGCCGCGCGCGACGGCGAATTCCCGTAGACTGCACGAGCCATGGCCGCGCGCGGCCGCCGCTCAACCTTCA
TGTCAATCGCTCGCTCATGTTCGCGCTTTCCGAAGCTCTCCCGTCATCGAAGCCCGCGCTCTACGAAACGCTCGCCGCTC
AGGCACGCGCGCTCGTCGAAACGGAGACCGACATCGTCGCCAATGCGGCGAATTTCGCATCGCTCGTCTATCACTCGCTC
GATGGCCTCAACTGGGCCGGGTTCTATTTCTTCGACGGTCGCGAGCTCGTCGTCGGGCCGTTCCAGGGCAAGCCCGCGTG
CGTGCGCATCCCGCTCGGCAAGGGCGTGTGCGGCACCGCCGCGCAGACGCGCGGCACGCAGGTCGTGCACGACGTGCACG
CGTTTGCCGGCCACATTGCCTGCGATTCGGCGTCGCAATCGGAAATCGTCGTGCCGCTCGTCGCGCGCGACGGCGCGCTG
ATCGGCGTATGGGACGTCGATAGCCCGCTCGTCGGCCGCTTCGACGCAGAGGATGCGACAGGGATGGAGGCGCTGTGCCG
GGTGTTCGTCGAGGTTGCGTGGGAAAACGCAACGCGGCGCGGCGAGTAA

Upstream 100 bases:

>100_bases
CAGCGTTTCGCCGCGCTCGAGCCGGATTAGACGAACGCTCGGGCATCCGGCCGATATCGCGCGCGCAGTCGACCGAGCGC
CGATCGAATCCGGCTCGCCC

Downstream 100 bases:

>100_bases
ATCGGCATCCGGCCATGGCAGCCGCCCGCACGTGAGCGGGCGCGAAAGGCGGTTGATTGCGCTGGTCGGCGGATCGGCGC
TGACGGCGCGCGGCCGCCGG

Product: GAF domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRRRRARRRIPVDCTSHGRARPPLNLHVNRSLMFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSL
DGLNWAGFYFFDGRELVVGPFQGKPACVRIPLGKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASQSEIVVPLVARDGAL
IGVWDVDSPLVGRFDAEDATGMEALCRVFVEVAWENATRRGE

Sequences:

>Translated_202_residues
MRRRRARRRIPVDCTSHGRARPPLNLHVNRSLMFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSL
DGLNWAGFYFFDGRELVVGPFQGKPACVRIPLGKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASQSEIVVPLVARDGAL
IGVWDVDSPLVGRFDAEDATGMEALCRVFVEVAWENATRRGE
>Mature_202_residues
MRRRRARRRIPVDCTSHGRARPPLNLHVNRSLMFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSL
DGLNWAGFYFFDGRELVVGPFQGKPACVRIPLGKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASQSEIVVPLVARDGAL
IGVWDVDSPLVGRFDAEDATGMEALCRVFVEVAWENATRRGE

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=143, Percent_Identity=51.0489510489511, Blast_Score=150, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6322781, Length=154, Percent_Identity=42.8571428571429, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 21913; Mature: 21913

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRRARRRIPVDCTSHGRARPPLNLHVNRSLMFALSEALPSSKPALYETLAAQARALVE
CCCCHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TETDIVANAANFASLVYHSLDGLNWAGFYFFDGRELVVGPFQGKPACVRIPLGKGVCGTA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCC
AQTRGTQVVHDVHAFAGHIACDSASQSEIVVPLVARDGALIGVWDVDSPLVGRFDAEDAT
CCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
GMEALCRVFVEVAWENATRRGE
CHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRRRRARRRIPVDCTSHGRARPPLNLHVNRSLMFALSEALPSSKPALYETLAAQARALVE
CCCCHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TETDIVANAANFASLVYHSLDGLNWAGFYFFDGRELVVGPFQGKPACVRIPLGKGVCGTA
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCC
AQTRGTQVVHDVHAFAGHIACDSASQSEIVVPLVARDGALIGVWDVDSPLVGRFDAEDAT
CCCCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
GMEALCRVFVEVAWENATRRGE
CHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]