| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813177
Identifier: 237813177
GI number: 237813177
Start: 2865562
End: 2866008
Strand: Direct
Name: 237813177
Synonym: GBP346_A2939
Alternate gene names: NA
Gene position: 2865562-2866008 (Clockwise)
Preceding gene: 237813176
Following gene: 237813178
Centisome position: 69.92
GC content: 66.44
Gene sequence:
>447_bases ATGACGCTCAAACCAACCCTCCTCGCCGCGCTCGCCGCCCTCTCGCTCAGCCTGAACGCCCATGCGGCCGGCGCCGCCTC GATCAGCGCGCAGAACGCGTGGGTGCGCTGGCTGCCGAACAAGCTGCCCGCCGCCGGCTACGTGACGCTCGTCAACGCGA GCGACAAGCCGATCGATCTCGTCGAAGTCGACAGCCCCGAATACGGGATGACGATGCTGCACCAGACCGTGTCGAACGGC TCGACGCAAAAGATGGAGATGGTCGACAAGCTGACGATCCCCGCGCGCGGCAAGGTCGACATCGCGCCGGGCGGCTATCA CTTCATGCTCGAGGAACCGAAGCGCGCGATCAAGCCGGGCGACACCGTGCATTTGCGCATGCAGTTCTCCGACGGCGAGA AGCTCGACGCACCGTTCGCCGTGAAGTCGCCCGCGGCCGCCCAGTAA
Upstream 100 bases:
>100_bases TGCTCGCGACCGACCAGGATTCCCCCGACGCGATCGCCGCCGATCTGCGCCGGATCATCGTCAACCGTTCCTGAACCGGA ACCCATTTACCACTCAGCCG
Downstream 100 bases:
>100_bases GCCCCGCGCGATGAACCTGCTGTACTGGCTCGAGCCGTGGGAGCCGTCGCCCACCGTCGTGATCGCCGTGCTCGTGGCCG GCGTGCTGTTCGCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTLKPTLLAALAALSLSLNAHAAGAASISAQNAWVRWLPNKLPAAGYVTLVNASDKPIDLVEVDSPEYGMTMLHQTVSNG STQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKRAIKPGDTVHLRMQFSDGEKLDAPFAVKSPAAAQ
Sequences:
>Translated_148_residues MTLKPTLLAALAALSLSLNAHAAGAASISAQNAWVRWLPNKLPAAGYVTLVNASDKPIDLVEVDSPEYGMTMLHQTVSNG STQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKRAIKPGDTVHLRMQFSDGEKLDAPFAVKSPAAAQ >Mature_147_residues TLKPTLLAALAALSLSLNAHAAGAASISAQNAWVRWLPNKLPAAGYVTLVNASDKPIDLVEVDSPEYGMTMLHQTVSNGS TQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKRAIKPGDTVHLRMQFSDGEKLDAPFAVKSPAAAQ
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15794; Mature: 15663
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKPTLLAALAALSLSLNAHAAGAASISAQNAWVRWLPNKLPAAGYVTLVNASDKPIDL CCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEEE VEVDSPEYGMTMLHQTVSNGSTQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKRAIKPG EEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCHHHCCCC DTVHLRMQFSDGEKLDAPFAVKSPAAAQ CEEEEEEEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure TLKPTLLAALAALSLSLNAHAAGAASISAQNAWVRWLPNKLPAAGYVTLVNASDKPIDL CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEEE VEVDSPEYGMTMLHQTVSNGSTQKMEMVDKLTIPARGKVDIAPGGYHFMLEEPKRAIKPG EEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCEEEEEECCHHHCCCC DTVHLRMQFSDGEKLDAPFAVKSPAAAQ CEEEEEEEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA