| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813178
Identifier: 237813178
GI number: 237813178
Start: 2866019
End: 2866891
Strand: Direct
Name: 237813178
Synonym: GBP346_A2940
Alternate gene names: NA
Gene position: 2866019-2866891 (Clockwise)
Preceding gene: 237813177
Following gene: 237813181
Centisome position: 69.93
GC content: 69.3
Gene sequence:
>873_bases ATGAACCTGCTGTACTGGCTCGAGCCGTGGGAGCCGTCGCCCACCGTCGTGATCGCCGTGCTCGTGGCCGGCGTGCTGTT CGCGCGCGGCGCGCGCAAGGCGAAGGTGTCGGCGTCGCGGCGCGTCGCGTTCTGGTTCGGACTCGTCGCGCTGTACGTGG CGCTGCACACGCGGCTCGACTATTTCTTCGAGCACGAGTTCTTCATGCACCGCGCGCAGCATTTGGTGCTGCACCACCTC GGGCCATTCTTCATCGCGCTGTCGTACCCCGGCGCGGCGATCCGCGCGGGCATCCCCTTCGCGTGGCGGCAGCGCTTCGT GCGCCCCGCGCTCGCGCAGCCGTTCGTGCGCGCGACGCTCGACGTGCTGTTCAATCCGGTCGTCGCGGTCGTGCTGTTCG TCGGCCTGATCTATTTCTGGCTGCTTTCGCCGATCCACTTCGTCGCGATGCTCGACTGGCGGCTCTACCGCGTGATGAAC TGGAGCATGGTGATCGACGGGCTGCTGTTCTGGTGGCTCGTCGTCGATCCGCGGCCCGCGCCCCCCGCCCGGCTCGCACC GGGGCGGCGCATCCTGATGGTCGTCGCGGCGATTCCGCCGCAGATCGTGCTCGGCGCGCTGATCTTCTTCACGCCGCACG AGCTCTATCCGATCTATTCGATCTGCGGGCGCGCGTTCACGTGGTTGAGCCCGCTGCGCGATCAGCAGATCGGCGGGCTG CTGCTATGGATTCCCGGCTCGATGATGAGCGTGATCGGCGCGCTGATCGCGCTGCGCCACTGGATGCGGCTGTCCGCGCG CGGCCGGCTCTCCGACGAGCGCGCGGCGCGCGCCGGGCTCGCGCGCAGGCAGGCGGCCCGCGCATCGCATTGA
Upstream 100 bases:
>100_bases GGCGACACCGTGCATTTGCGCATGCAGTTCTCCGACGGCGAGAAGCTCGACGCACCGTTCGCCGTGAAGTCGCCCGCGGC CGCCCAGTAAGCCCCGCGCG
Downstream 100 bases:
>100_bases CGATCGCGACGAGCGCCGACGGCAATCAGCAGGAATAGCCGCCGACCGTCATCACGCGATACGCGCCCGGCCCGCGCGCG CCGACTCCCCGCGATTCCCG
Product: membrane protein
Products: NA
Alternate protein names: Cytochrome C Oxidase Caa3 Assembly Factor Family Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNLLYWLEPWEPSPTVVIAVLVAGVLFARGARKAKVSASRRVAFWFGLVALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAIRAGIPFAWRQRFVRPALAQPFVRATLDVLFNPVVAVVLFVGLIYFWLLSPIHFVAMLDWRLYRVMN WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILMVVAAIPPQIVLGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL LLWIPGSMMSVIGALIALRHWMRLSARGRLSDERAARAGLARRQAARASH
Sequences:
>Translated_290_residues MNLLYWLEPWEPSPTVVIAVLVAGVLFARGARKAKVSASRRVAFWFGLVALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAIRAGIPFAWRQRFVRPALAQPFVRATLDVLFNPVVAVVLFVGLIYFWLLSPIHFVAMLDWRLYRVMN WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILMVVAAIPPQIVLGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL LLWIPGSMMSVIGALIALRHWMRLSARGRLSDERAARAGLARRQAARASH >Mature_290_residues MNLLYWLEPWEPSPTVVIAVLVAGVLFARGARKAKVSASRRVAFWFGLVALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAIRAGIPFAWRQRFVRPALAQPFVRATLDVLFNPVVAVVLFVGLIYFWLLSPIHFVAMLDWRLYRVMN WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILMVVAAIPPQIVLGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL LLWIPGSMMSVIGALIALRHWMRLSARGRLSDERAARAGLARRQAARASH
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33010; Mature: 33010
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLYWLEPWEPSPTVVIAVLVAGVLFARGARKAKVSASRRVAFWFGLVALYVALHTRLD CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGIPFAWRQRFVRPALAQPFVRATL HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DVLFNPVVAVVLFVGLIYFWLLSPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLAPGRRILMVVAAIPPQIVLGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLWIPGSMMSVIGALIALRHWMRLSARGRLSDERAARAGLARRQAARASH EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLLYWLEPWEPSPTVVIAVLVAGVLFARGARKAKVSASRRVAFWFGLVALYVALHTRLD CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGIPFAWRQRFVRPALAQPFVRATL HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DVLFNPVVAVVLFVGLIYFWLLSPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLAPGRRILMVVAAIPPQIVLGALIFFTPHELYPIYSICGRAFTWLSPLRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLWIPGSMMSVIGALIALRHWMRLSARGRLSDERAARAGLARRQAARASH EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA