Click here to switch to the map view.

The map label for this gene is 237813165

Identifier: 237813165

GI number: 237813165

Start: 2855676

End: 2856848

Strand: Direct

Name: 237813165

Synonym: GBP346_A2927

Alternate gene names: NA

Gene position: 2855676-2856848 (Clockwise)

Preceding gene: 237813163

Following gene: 237813169

Centisome position: 69.67

GC content: 71.18

Gene sequence:

>1173_bases
ATGCATTCGAAAGTCGTCATCGTCGGCGGCGGCGTCATCGGCAGCGCGACCGCCTATTTCCTGCGCACGCTCGATCCGGG
CATCGACGTGACCGTGATCGAGCGCGATCCCACCTACGCGCGCGCGTCGTCCGCGCTGTCCGCGGCGTCGATCCGCCAGC
AATTCTCGACGCCGTTGTCGATCCGGATGTCGCTGTTCGGCATCGAGTTCCTGCGCTCGCTCGGCGAGCGCCTCGCGCTC
GACGGCGAACGCCCGTCGATCGATCTGCACGAAGGCGGCTACCTGTTTCTCGCGACGCCCGCGGGCGTCGCGACGCTGCG
CGAGAACCACGCGCTGCAGACCTCGCTCGGCGCGCAGATCCGCTACCTGCCGCGCGACGCGCTCGCCGCGACGTTCCCGT
GGCTCGCCGTCGACGATCTCGCGGCCGGCTGCCTCGGCGAGCGCGGCGAAGGCTGGTTCGACGGCTACGGGCTCGTGCAG
GCGCTGCGCAAGAAGGCGCGCGCGCTCGGCGCGCAATACGTGAGCGCGGACGTGACGGGCGCGCGCCTCGACGGGCGGCG
CGTCACGCGACTGCTCACGGCCGACGGCCGCGCGTTCGACTGCGACGCGCTCGTCAACGCCGCGGGGCCGTGGGCGCGCA
CGGTCGCGGCGCTCGTCGGCGTCGATCTGCCGGTGCGCGCGCGCCGCCGCAGCATCTTCAACGTGACCTCGCCCGCCGTG
CTGCCGCGCTGCCCGCTCGTCATCGATCCGAGCGGCGTCTATTTCCGGCCGGAAGGCGCGTCGTTCATTTGCGGCGCGGC
GCCGCCGCCGGCGCGCGATTTCGACGATCTGCCGCTCGACGACGTCGACCACGCGCTCTTCGACGAGCTGATCTGGCCGA
CGCTCGCGCACCGCGTGCCGCAGTTCGAGGCGCTGCGGGTCGTGCGGAGCTGGTCCGGCTATTACGAATACAACGTGCTC
GACCAGAACGCGATCATCGGGCCGCACCCGGCCGTCGACAACTGCATCTTCGCGAACGGCTTCTCGGGACACGGGCTGCA
GCAGGGGCCGGCGACGGGACGCGGCGTCGCCGAGCTGATCGTGCATGGGCGATACACGTCGCTCGATCTGTCGCCGCTCG
GCTTCGCGCGCGTGCTCGAAGGCCGGCCGATCGTCGAGAAGAATGTCGTGTGA

Upstream 100 bases:

>100_bases
GACCGGCCGCCCATGTATGGAGCGGACCGCGCGCGACGCGCTGCACGCGCGCGGCCCGGGTCCCGAACGGCGCGCATCGC
GCCCAACCCATGGAGTTTCG

Downstream 100 bases:

>100_bases
CGGGAGAAAGCGCGCGCAGGCGCGAAGCAGGCGGCGGACGCGAAAACCATGAGCGGGCGCGGCGGCGGCATGCTCGATGC
GGCGGCCGCCGCGACGGCGG

Product: oxidoreductase, FAD-binding family protein

Products: NA

Alternate protein names: Oxidoreductase; Sarcosine Oxidase Subunit Beta; Sarcosine Oxidase Beta Subunit; Glycine/D-Amino Acid Oxidase Deaminating; Glycine Oxidase ThiO; Sarcosine Oxidase Beta Subunit Family Protein; Proline Dehydrogenase Beta Subunit; FAD-Dependent Oxidoreductase Domain-Containing; Oxidoreductase Protein; Dye-Linked L-Proline Dehydrogenase Beta2 Subunit; Glycine/D-Amino Acid Oxidase; Sarcosine Oxidase Subunit Beta Family Protein; Fad-Dependent Oxidoreductase; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MHSKVVIVGGGVIGSATAYFLRTLDPGIDVTVIERDPTYARASSALSAASIRQQFSTPLSIRMSLFGIEFLRSLGERLAL
DGERPSIDLHEGGYLFLATPAGVATLRENHALQTSLGAQIRYLPRDALAATFPWLAVDDLAAGCLGERGEGWFDGYGLVQ
ALRKKARALGAQYVSADVTGARLDGRRVTRLLTADGRAFDCDALVNAAGPWARTVAALVGVDLPVRARRRSIFNVTSPAV
LPRCPLVIDPSGVYFRPEGASFICGAAPPPARDFDDLPLDDVDHALFDELIWPTLAHRVPQFEALRVVRSWSGYYEYNVL
DQNAIIGPHPAVDNCIFANGFSGHGLQQGPATGRGVAELIVHGRYTSLDLSPLGFARVLEGRPIVEKNVV

Sequences:

>Translated_390_residues
MHSKVVIVGGGVIGSATAYFLRTLDPGIDVTVIERDPTYARASSALSAASIRQQFSTPLSIRMSLFGIEFLRSLGERLAL
DGERPSIDLHEGGYLFLATPAGVATLRENHALQTSLGAQIRYLPRDALAATFPWLAVDDLAAGCLGERGEGWFDGYGLVQ
ALRKKARALGAQYVSADVTGARLDGRRVTRLLTADGRAFDCDALVNAAGPWARTVAALVGVDLPVRARRRSIFNVTSPAV
LPRCPLVIDPSGVYFRPEGASFICGAAPPPARDFDDLPLDDVDHALFDELIWPTLAHRVPQFEALRVVRSWSGYYEYNVL
DQNAIIGPHPAVDNCIFANGFSGHGLQQGPATGRGVAELIVHGRYTSLDLSPLGFARVLEGRPIVEKNVV
>Mature_390_residues
MHSKVVIVGGGVIGSATAYFLRTLDPGIDVTVIERDPTYARASSALSAASIRQQFSTPLSIRMSLFGIEFLRSLGERLAL
DGERPSIDLHEGGYLFLATPAGVATLRENHALQTSLGAQIRYLPRDALAATFPWLAVDDLAAGCLGERGEGWFDGYGLVQ
ALRKKARALGAQYVSADVTGARLDGRRVTRLLTADGRAFDCDALVNAAGPWARTVAALVGVDLPVRARRRSIFNVTSPAV
LPRCPLVIDPSGVYFRPEGASFICGAAPPPARDFDDLPLDDVDHALFDELIWPTLAHRVPQFEALRVVRSWSGYYEYNVL
DQNAIIGPHPAVDNCIFANGFSGHGLQQGPATGRGVAELIVHGRYTSLDLSPLGFARVLEGRPIVEKNVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI8923708, Length=419, Percent_Identity=39.3794749403341, Blast_Score=282, Evalue=4e-76,
Organism=Homo sapiens, GI24797151, Length=405, Percent_Identity=25.679012345679, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI197927446, Length=380, Percent_Identity=26.0526315789474, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI21361378, Length=380, Percent_Identity=26.0526315789474, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17541536, Length=433, Percent_Identity=34.4110854503464, Blast_Score=238, Evalue=4e-63,
Organism=Drosophila melanogaster, GI20129729, Length=416, Percent_Identity=39.4230769230769, Blast_Score=273, Evalue=1e-73,
Organism=Drosophila melanogaster, GI17985989, Length=425, Percent_Identity=35.0588235294118, Blast_Score=221, Evalue=8e-58,
Organism=Drosophila melanogaster, GI20130091, Length=385, Percent_Identity=24.9350649350649, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41997; Mature: 41997

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKVVIVGGGVIGSATAYFLRTLDPGIDVTVIERDPTYARASSALSAASIRQQFSTPLS
CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH
IRMSLFGIEFLRSLGERLALDGERPSIDLHEGGYLFLATPAGVATLRENHALQTSLGAQI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCHHHCCCCEE
RYLPRDALAATFPWLAVDDLAAGCLGERGEGWFDGYGLVQALRKKARALGAQYVSADVTG
EECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ARLDGRRVTRLLTADGRAFDCDALVNAAGPWARTVAALVGVDLPVRARRRSIFNVTSPAV
CCCCCHHEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
LPRCPLVIDPSGVYFRPEGASFICGAAPPPARDFDDLPLDDVDHALFDELIWPTLAHRVP
CCCCCEEECCCCCEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
QFEALRVVRSWSGYYEYNVLDQNAIIGPHPAVDNCIFANGFSGHGLQQGPATGRGVAELI
HHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
VHGRYTSLDLSPLGFARVLEGRPIVEKNVV
CCCCCCEECCCCCCHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MHSKVVIVGGGVIGSATAYFLRTLDPGIDVTVIERDPTYARASSALSAASIRQQFSTPLS
CCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHH
IRMSLFGIEFLRSLGERLALDGERPSIDLHEGGYLFLATPAGVATLRENHALQTSLGAQI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCHHHHHHCCCHHHCCCCEE
RYLPRDALAATFPWLAVDDLAAGCLGERGEGWFDGYGLVQALRKKARALGAQYVSADVTG
EECCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ARLDGRRVTRLLTADGRAFDCDALVNAAGPWARTVAALVGVDLPVRARRRSIFNVTSPAV
CCCCCHHEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
LPRCPLVIDPSGVYFRPEGASFICGAAPPPARDFDDLPLDDVDHALFDELIWPTLAHRVP
CCCCCEEECCCCCEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
QFEALRVVRSWSGYYEYNVLDQNAIIGPHPAVDNCIFANGFSGHGLQQGPATGRGVAELI
HHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
VHGRYTSLDLSPLGFARVLEGRPIVEKNVV
CCCCCCEECCCCCCHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA