| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813106
Identifier: 237813106
GI number: 237813106
Start: 2801380
End: 2801826
Strand: Reverse
Name: 237813106
Synonym: GBP346_A2868
Alternate gene names: NA
Gene position: 2801826-2801380 (Counterclockwise)
Preceding gene: 237813107
Following gene: 237813105
Centisome position: 68.36
GC content: 68.46
Gene sequence:
>447_bases ATGAACCATGAAACGAAAACGCTGCCGATCGTCTATTCCTGCTCGGGGTGCTCGAATGTCGCGCAGCTCGCGAATCACGT CGCGGTGCGGCTCGATCGCGGCGGCGATGCGGAGATGTCGTGCATCGCGGGCGTGGGCGGCGACGTGCCGTCGCTGCTGA AGATCGCGCATTCGGGGCGGCCGATTCTCGCGATCGACGGCTGCCCGCTCGTATGCGCGAAGAAGAGCCTCGAGCGGCAC GGGATCGCGCCCGATGCGCATCTGCAGCTCGGCGAGCACGGCGTCAGAAAGCGCTTTCACGAGGATTTCGCCCCGGGCGA CGCGAGCCGCATATTCGCGATCGCGAAAGCCGAAGCGGCGCGGCTCGCGGGAAGCCGGCCCGCGCCCGAACCCGAACTCG CGCAGGCGGGCGAGGATGCCGGCGCCGCGCTTGAACGCAAGCGCTGA
Upstream 100 bases:
>100_bases GTGGCTGCCGACGCGGCTGTTCCGACAACGGCCGCTCGAACGCGACGCAATGCCGGACTGAAATACGCGCAAGCGGCGAA CGGGCGATCAGGAGACCGGA
Downstream 100 bases:
>100_bases CTTCCGCCGACTTCCGATATCCGATGCGCGGCGCGCGTGGCCGAGCGGCGGCTGCTCGACCCGATCGGCTACCCGGCGAT CGAGCCCGCGGCCACGGTTG
Product: DGC domain superfamily
Products: NA
Alternate protein names: DGC Domain-Containing Protein; Lipoprotein; DGC Domain Superfamily; Dgc Domain Protein; Lipoprotein COG
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRIFAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR
Sequences:
>Translated_148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRIFAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR >Mature_148_residues MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGRPILAIDGCPLVCAKKSLERH GIAPDAHLQLGEHGVRKRFHEDFAPGDASRIFAIAKAEAARLAGSRPAPEPELAQAGEDAGAALERKR
Specific function: Unknown
COG id: COG4273
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15506; Mature: 15506
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGR CCCCCCEEEEEEECCCCHHHHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCC PILAIDGCPLVCAKKSLERHGIAPDAHLQLGEHGVRKRFHEDFAPGDASRIFAIAKAEAA CEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHH RLAGSRPAPEPELAQAGEDAGAALERKR HHCCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNHETKTLPIVYSCSGCSNVAQLANHVAVRLDRGGDAEMSCIAGVGGDVPSLLKIAHSGR CCCCCCEEEEEEECCCCHHHHHHHHHHEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCC PILAIDGCPLVCAKKSLERHGIAPDAHLQLGEHGVRKRFHEDFAPGDASRIFAIAKAEAA CEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHH RLAGSRPAPEPELAQAGEDAGAALERKR HHCCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA