| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yhbT [H]
Identifier: 237813107
GI number: 237813107
Start: 2801866
End: 2802345
Strand: Reverse
Name: yhbT [H]
Synonym: GBP346_A2869
Alternate gene names: 237813107
Gene position: 2802345-2801866 (Counterclockwise)
Preceding gene: 237813108
Following gene: 237813106
Centisome position: 68.37
GC content: 64.79
Gene sequence:
>480_bases ATGAATGCTCCAGTCTTTCAGCTGCCGCCCACGCTCGGCAAGCTGCTGTCGAAACTGCCCGCGTATCCGGGCGCGCTGCT GTTCGCAAGCGGGATCAATCTCGTGCTGCGCCGGCATTTGCCGGCGGAGACGCTCGCGCTGCTGGAGGATCGCCCGCTGC GCATTCAGGTGAAGGACGCGGGCGTCGCCTTCGATTTCGTTTGCCGGCGTGGGGCATTTTCGGCGCTGTCCGGCGGGCGG GATGTCGATCTGACGATCGGCGCGACCGCGTACGATTTCTATCTGCTGTCGCAGCGCCGCGAAGACCCCGACACATTGTT CTTCAGCCGGCGCCTGACGATGGAGGGCGACACCGAGCTCGGCTTGCTCGTGAAGAATTCGCTCGACGCGATCGATCTGT CGGTGTTTTCGCTCGAGCGGTGGCTGCCGACGCGGCTGTTCCGACAACGGCCGCTCGAACGCGACGCAATGCCGGACTGA
Upstream 100 bases:
>100_bases GGCTACTGGCACGGCAAGCCGGGCCTCGAGCGCGTCGCGCGCTGAGGCCGCGGCGCGGCGTGCGCCGCGCCGCTTCGGAC CCGTTGATGAGGAATCCCCG
Downstream 100 bases:
>100_bases AATACGCGCAAGCGGCGAACGGGCGATCAGGAGACCGGAATGAACCATGAAACGAAAACGCTGCCGATCGTCTATTCCTG CTCGGGGTGCTCGAATGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNAPVFQLPPTLGKLLSKLPAYPGALLFASGINLVLRRHLPAETLALLEDRPLRIQVKDAGVAFDFVCRRGAFSALSGGR DVDLTIGATAYDFYLLSQRREDPDTLFFSRRLTMEGDTELGLLVKNSLDAIDLSVFSLERWLPTRLFRQRPLERDAMPD
Sequences:
>Translated_159_residues MNAPVFQLPPTLGKLLSKLPAYPGALLFASGINLVLRRHLPAETLALLEDRPLRIQVKDAGVAFDFVCRRGAFSALSGGR DVDLTIGATAYDFYLLSQRREDPDTLFFSRRLTMEGDTELGLLVKNSLDAIDLSVFSLERWLPTRLFRQRPLERDAMPD >Mature_159_residues MNAPVFQLPPTLGKLLSKLPAYPGALLFASGINLVLRRHLPAETLALLEDRPLRIQVKDAGVAFDFVCRRGAFSALSGGR DVDLTIGATAYDFYLLSQRREDPDTLFFSRRLTMEGDTELGLLVKNSLDAIDLSVFSLERWLPTRLFRQRPLERDAMPD
Specific function: Unknown
COG id: COG3154
COG function: function code I; Putative lipid carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789547, Length=98, Percent_Identity=42.8571428571429, Blast_Score=75, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 - InterPro: IPR016830 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 17820; Mature: 17820
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVFQLPPTLGKLLSKLPAYPGALLFASGINLVLRRHLPAETLALLEDRPLRIQVKDA CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECC GVAFDFVCRRGAFSALSGGRDVDLTIGATAYDFYLLSQRREDPDTLFFSRRLTMEGDTEL CCHHHHHHHCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCE GLLVKNSLDAIDLSVFSLERWLPTRLFRQRPLERDAMPD EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNAPVFQLPPTLGKLLSKLPAYPGALLFASGINLVLRRHLPAETLALLEDRPLRIQVKDA CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECC GVAFDFVCRRGAFSALSGGRDVDLTIGATAYDFYLLSQRREDPDTLFFSRRLTMEGDTEL CCHHHHHHHCCCHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCE GLLVKNSLDAIDLSVFSLERWLPTRLFRQRPLERDAMPD EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]