| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237813099
Identifier: 237813099
GI number: 237813099
Start: 2795316
End: 2796449
Strand: Direct
Name: 237813099
Synonym: GBP346_A2861
Alternate gene names: NA
Gene position: 2795316-2796449 (Clockwise)
Preceding gene: 237813098
Following gene: 237813100
Centisome position: 68.2
GC content: 76.81
Gene sequence:
>1134_bases ATGCCCGCCCCCAAGCAACCGGCCGCTTCGCTCGCCCGCCCGCTCGTTCGCGCGACGGCGGGCGTCGTCATCGTCGCGCT GCTCGCGTGCGGCATCGCGACAGGCCTCGCGCGGCTCGGCGCGCCGGCGCCCACGCATGCGGTATCGCGGCTCGCGTGGC ACGGCGTGCTGATGATTCCGGTATTCTTCGGCGCGGTGATCGGCGTCGAGCGCGCGGTCGCGCTCGGCGCGCGCTGGGCG TATCTCGTGCCCGCGACGGCCGCCGCGGCCGGCCTCTCGTTGCTCGCGGGCGCGCCGGCGATGCGCGCCGCCGCGCTGCT GACCGGCGCGGCGAGCATCGCGCTCGCCGTCAGCGCCGCGGTGCTGCGGCGGCAAGCCGCGCTGTTCCTGTGGGTGCTCG CCGCGAGCGTCGGGTGCTGGTGGGCGGGCAACGCCGTCTGGCTGCTGACGGGCGATCCGTTCGCCGCCGTCGCGTGGTGG CTCGCGTTCCTGATCCTGACGATCGCCGCCGAGCGGCTCGAGCTCACGCGCGTGCGCCCGCTGCCGCGCGGCGCGAGCGC CTGCTTCTGCGGCATCGTCGCGCTGCTGCCGGCGGCCGCCGCGCTCGCGTCATGGCAGCCGCTGCCCGCGCTGCGGCTGT TCGGCGCGGGCGAGCTGCTGCTCGCGGCGTGGCTCGTGCGCTACGACGTCGCGCGCCGCACGGTGCGCCAGCGCGGCCTC ACGCGCTTCATCGCCGTCTGCCTGCTGTCCGGCTACGGGTGGCTCGCGGTGAGCGGCGCGCTCGGCCTGGACGGCGCGCT CGCGCCCGGCCATCCGGCGCACGACGCCGCGCTGCACGCGCTCACGCTCGGCTTCGTGTTTTCGATGATCCTCGGGCACA TGCCGATCATCGTGCCGGCCGTCGCGCGGCTGCGCGTCGCGTATCGGCCGTTCTTCTACGCGCCACTCGCGCTCCTGCAC GCGGCCGTCGCGCTGCGCGTGGCGGGCGGCCTGCTCGATGCGTTCGCGCTCACGCGCGCGGGCGGCGAGATCGCCGCGCT CGCGATCGCGAGCTTCGCCGCCACGCTCGCGATCGGCATCGCGCTCGCGCGCCGTTCGGCGTCGCACCGCGGCGCCGGCA AGCGCGCCGCTTAG
Upstream 100 bases:
>100_bases GATGAGCGAGGCCGCGCGCGAGCAGATGGGCTGGCCGATCGCTTGACACATCGTTCACGCATCGTTCCCCCCCTCTGTCG CGCATCGCGCGCTCGACGCC
Downstream 100 bases:
>100_bases TCCGTCGCGTCCGCCGCGTCAACGCGCGGACGCGCGCGCCTTGCGCGCGGACAACACCGCGGCCGCGCAATCTTGTCGCA GCGCACGCGCGCGCTTCTTC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPAPKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPTHAVSRLAWHGVLMIPVFFGAVIGVERAVALGARWA YLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAAVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWW LAFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLH AAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA
Sequences:
>Translated_377_residues MPAPKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPTHAVSRLAWHGVLMIPVFFGAVIGVERAVALGARWA YLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAAVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWW LAFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLH AAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA >Mature_376_residues PAPKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPTHAVSRLAWHGVLMIPVFFGAVIGVERAVALGARWAY LVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAAVLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWL AFLILTIAAERLELTRVRPLPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGLT RFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPAVARLRVAYRPFFYAPLALLHA AVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGIALARRSASHRGAGKRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38685; Mature: 38553
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPTHAVSRLAWHGVLMIP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VFFGAVIGVERAVALGARWAYLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWLAFLILTIAAERLELTRVRP HHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPA HHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VARLRVAYRPFFYAPLALLHAAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALARRSASHRGAGKRAA HHHHHHHHCCCCCCCCC >Mature Secondary Structure PAPKQPAASLARPLVRATAGVVIVALLACGIATGLARLGAPAPTHAVSRLAWHGVLMIP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VFFGAVIGVERAVALGARWAYLVPATAAAAGLSLLAGAPAMRAAALLTGAASIALAVSAA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLRRQAALFLWVLAASVGCWWAGNAVWLLTGDPFAAVAWWLAFLILTIAAERLELTRVRP HHHHHHHHHHHHHHHHHCCEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC LPRGASACFCGIVALLPAAAALASWQPLPALRLFGAGELLLAAWLVRYDVARRTVRQRGL CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TRFIAVCLLSGYGWLAVSGALGLDGALAPGHPAHDAALHALTLGFVFSMILGHMPIIVPA HHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VARLRVAYRPFFYAPLALLHAAVALRVAGGLLDAFALTRAGGEIAALAIASFAATLAIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALARRSASHRGAGKRAA HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA