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The map label for this gene is yfdE [H]

Identifier: 237813067

GI number: 237813067

Start: 2763256

End: 2764800

Strand: Reverse

Name: yfdE [H]

Synonym: GBP346_A2828

Alternate gene names: 237813067

Gene position: 2764800-2763256 (Counterclockwise)

Preceding gene: 237813068

Following gene: 237813066

Centisome position: 67.46

GC content: 71.26

Gene sequence:

>1545_bases
ATGAGCGGCAATGTCTCGAAGCGATTGCGGGCCTCGAGCGGATCGGAGATCGGGCGCGCCGCCGCCGGTGCGAGCGATGC
GGCAGGGGCGGCCGGCACCGCCGGCGCGTTCGCGGACGCGGCGCATCCGTTGCCGCCGGCGGGCGGGCTTTGCATGTCGT
CCGAGGGAGGCGTGCCGCCGGGAACGGCGATCGCCGACGCGACGGCCACGGCGTCCGATGCGCGCACGGCGTTCGCCGCA
AATACCAAAGACACCAAAGACACCAAAGACACCAAAGACACCAAAGACACCAAAGACACCACATCCCGCCCGTCCCTCGC
CGCCGCGAATCATGCAACCGGGCCCGTCCGCCCTGGCGCGCTCGCCGGCCTGAAAATCATCGACCTGAGCCGCGTCCTCG
GCGGCCCGTACTGCACGCAGGCGCTCGCGGACCACGGCGCGCGCGTGATCAAGATCGAGCCGCCGGCGGGCGACGAAACG
CGCGGCTGGGGCCCGCCGTTCCTCGACGACGACGCGTGGTACTTCACCGGCGTGAATCGCAACAAGGAAGGGATCGTGCT
CGACTTGTCGCGCGACGAAGGCCGCGCGATCCTCTGGCGTCTGCTCGAAGGCGCGGACGTGCTTGTCGAAAACTTCAAGC
CCGGCACGCTCGCGCGCTGGGGGATGGACTACGAGCGGGACTTGCGGCCGCGCTTTGCGCGCCTCGTCCATTGCGCGATC
ACGGGTTTCGGCGCCGACGGCCCGCTCGGCGGGCTGCCCGGCTACGATGCGGTGATCCAGGCGATGGCGGGCCTCATGAG
CGTGAACGGCGATGCCGGTGGCGACGCGACGCGCATCGGCCTGCCGATCGTCGACATGGTGACGGGCCTGAACGCGCTCG
CCGGCATCCTGCTCGCGCTCGCCGAGCGCGAGAGAAGCGGCGTGGGCCAGTCGATCGACATCGCGCTGTACGACTGCGGC
GTGTCGCTGCTGCATCCGCACCTGCCGAACTGGTTCGGCTCGGGGCGCACCCCCGCCCGCAGCGGCAACGCGCATCCGAA
CATCGCACCGTACGACAGCTACCGCACCGCGAGCGCGCCGATCTTTCTCGCGATTGGCAACGACCGGCAGTTCGCGCGGC
TTTGCGCACACCTTGGCGTGCCCGCGCTCGCGAGCGATCCGCGTTTTATCGACAACCGCAGCCGCTGCGCGCATCGCGCC
GAGCTGAAGGCGAGCCTCGAGGCGCGGCTCGCCGGCCGCGATGGCGAGACGCTCGCGCGCGAGCTGATGGCCGAGGGCGT
GCCGTGCGGGCCGGTGCGCACGATCGATGCGCTCGCGTGCGATCCGCACACGCTGCATCGCGGGCTCGTCGTCGAGATGG
GGCGATACCGCGGCGCGGCGTCGCCGATCAAGCTCTCGCGCACGCCCGCGACGTACCGCACCGCGCCGCCCACGCTCGGC
CGCGATACGCGCGCGGTGCTCGACGCGCTCGGCATCGATGCGGCGACGCAGGCGCGGCTCGCCGACGCGGGCGTGCTCAA
GGAGGCGAAACCAATGGCGACGTGA

Upstream 100 bases:

>100_bases
CGGACGCGGAGGCCGGCGTGCTGGCGGCGTTGTTGCACGATCGGCCCGTCACGCTCGACGACGCGTTGCGCCTGCTCGAC
GATGGTTCGGGAGACGCGGC

Downstream 100 bases:

>100_bases
GCGAACGGCCGCGGCCCGCCGACGCGAAGCGGCGGCCGCGGCTCGAGGGTGCCGCCGGGTGCGCGCGCGGCCGGACGTCC
GGAAGGCGAGCGATCCGTCT

Product: caib/baif family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MSGNVSKRLRASSGSEIGRAAAGASDAAGAAGTAGAFADAAHPLPPAGGLCMSSEGGVPPGTAIADATATASDARTAFAA
NTKDTKDTKDTKDTKDTKDTTSRPSLAAANHATGPVRPGALAGLKIIDLSRVLGGPYCTQALADHGARVIKIEPPAGDET
RGWGPPFLDDDAWYFTGVNRNKEGIVLDLSRDEGRAILWRLLEGADVLVENFKPGTLARWGMDYERDLRPRFARLVHCAI
TGFGADGPLGGLPGYDAVIQAMAGLMSVNGDAGGDATRIGLPIVDMVTGLNALAGILLALAERERSGVGQSIDIALYDCG
VSLLHPHLPNWFGSGRTPARSGNAHPNIAPYDSYRTASAPIFLAIGNDRQFARLCAHLGVPALASDPRFIDNRSRCAHRA
ELKASLEARLAGRDGETLARELMAEGVPCGPVRTIDALACDPHTLHRGLVVEMGRYRGAASPIKLSRTPATYRTAPPTLG
RDTRAVLDALGIDAATQARLADAGVLKEAKPMAT

Sequences:

>Translated_514_residues
MSGNVSKRLRASSGSEIGRAAAGASDAAGAAGTAGAFADAAHPLPPAGGLCMSSEGGVPPGTAIADATATASDARTAFAA
NTKDTKDTKDTKDTKDTKDTTSRPSLAAANHATGPVRPGALAGLKIIDLSRVLGGPYCTQALADHGARVIKIEPPAGDET
RGWGPPFLDDDAWYFTGVNRNKEGIVLDLSRDEGRAILWRLLEGADVLVENFKPGTLARWGMDYERDLRPRFARLVHCAI
TGFGADGPLGGLPGYDAVIQAMAGLMSVNGDAGGDATRIGLPIVDMVTGLNALAGILLALAERERSGVGQSIDIALYDCG
VSLLHPHLPNWFGSGRTPARSGNAHPNIAPYDSYRTASAPIFLAIGNDRQFARLCAHLGVPALASDPRFIDNRSRCAHRA
ELKASLEARLAGRDGETLARELMAEGVPCGPVRTIDALACDPHTLHRGLVVEMGRYRGAASPIKLSRTPATYRTAPPTLG
RDTRAVLDALGIDAATQARLADAGVLKEAKPMAT
>Mature_513_residues
SGNVSKRLRASSGSEIGRAAAGASDAAGAAGTAGAFADAAHPLPPAGGLCMSSEGGVPPGTAIADATATASDARTAFAAN
TKDTKDTKDTKDTKDTKDTTSRPSLAAANHATGPVRPGALAGLKIIDLSRVLGGPYCTQALADHGARVIKIEPPAGDETR
GWGPPFLDDDAWYFTGVNRNKEGIVLDLSRDEGRAILWRLLEGADVLVENFKPGTLARWGMDYERDLRPRFARLVHCAIT
GFGADGPLGGLPGYDAVIQAMAGLMSVNGDAGGDATRIGLPIVDMVTGLNALAGILLALAERERSGVGQSIDIALYDCGV
SLLHPHLPNWFGSGRTPARSGNAHPNIAPYDSYRTASAPIFLAIGNDRQFARLCAHLGVPALASDPRFIDNRSRCAHRAE
LKASLEARLAGRDGETLARELMAEGVPCGPVRTIDALACDPHTLHRGLVVEMGRYRGAASPIKLSRTPATYRTAPPTLGR
DTRAVLDALGIDAATQARLADAGVLKEAKPMAT

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=395, Percent_Identity=35.6962025316456, Blast_Score=252, Evalue=6e-67,
Organism=Homo sapiens, GI300863124, Length=421, Percent_Identity=33.4916864608076, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI300863126, Length=395, Percent_Identity=31.8987341772152, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=30.166270783848, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI42794625, Length=404, Percent_Identity=26.7326732673267, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI266456254, Length=402, Percent_Identity=27.1144278606965, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI266458397, Length=263, Percent_Identity=31.9391634980989, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI266458393, Length=261, Percent_Identity=32.183908045977, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI266458395, Length=145, Percent_Identity=31.7241379310345, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI42822893, Length=147, Percent_Identity=32.6530612244898, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI87082093, Length=351, Percent_Identity=38.4615384615385, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1788717, Length=402, Percent_Identity=32.089552238806, Blast_Score=154, Evalue=2e-38,
Organism=Escherichia coli, GI1786222, Length=403, Percent_Identity=26.7990074441687, Blast_Score=108, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI115535051, Length=253, Percent_Identity=27.6679841897233, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI32564160, Length=333, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24648431, Length=396, Percent_Identity=40.1515151515151, Blast_Score=270, Evalue=2e-72,
Organism=Drosophila melanogaster, GI24585488, Length=199, Percent_Identity=29.1457286432161, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 53509; Mature: 53378

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNVSKRLRASSGSEIGRAAAGASDAAGAAGTAGAFADAAHPLPPAGGLCMSSEGGVPP
CCCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCC
GTAIADATATASDARTAFAANTKDTKDTKDTKDTKDTKDTTSRPSLAAANHATGPVRPGA
CCHHHCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCH
LAGLKIIDLSRVLGGPYCTQALADHGARVIKIEPPAGDETRGWGPPFLDDDAWYFTGVNR
HHCEEEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
NKEGIVLDLSRDEGRAILWRLLEGADVLVENFKPGTLARWGMDYERDLRPRFARLVHCAI
CCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
TGFGADGPLGGLPGYDAVIQAMAGLMSVNGDAGGDATRIGLPIVDMVTGLNALAGILLAL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
AERERSGVGQSIDIALYDCGVSLLHPHLPNWFGSGRTPARSGNAHPNIAPYDSYRTASAP
HHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IFLAIGNDRQFARLCAHLGVPALASDPRFIDNRSRCAHRAELKASLEARLAGRDGETLAR
EEEEECCCHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ELMAEGVPCGPVRTIDALACDPHTLHRGLVVEMGRYRGAASPIKLSRTPATYRTAPPTLG
HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
RDTRAVLDALGIDAATQARLADAGVLKEAKPMAT
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGNVSKRLRASSGSEIGRAAAGASDAAGAAGTAGAFADAAHPLPPAGGLCMSSEGGVPP
CCCHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCC
GTAIADATATASDARTAFAANTKDTKDTKDTKDTKDTKDTTSRPSLAAANHATGPVRPGA
CCHHHCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCH
LAGLKIIDLSRVLGGPYCTQALADHGARVIKIEPPAGDETRGWGPPFLDDDAWYFTGVNR
HHCEEEEEHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCC
NKEGIVLDLSRDEGRAILWRLLEGADVLVENFKPGTLARWGMDYERDLRPRFARLVHCAI
CCCCEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
TGFGADGPLGGLPGYDAVIQAMAGLMSVNGDAGGDATRIGLPIVDMVTGLNALAGILLAL
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
AERERSGVGQSIDIALYDCGVSLLHPHLPNWFGSGRTPARSGNAHPNIAPYDSYRTASAP
HHHHHHCCCCEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IFLAIGNDRQFARLCAHLGVPALASDPRFIDNRSRCAHRAELKASLEARLAGRDGETLAR
EEEEECCCHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ELMAEGVPCGPVRTIDALACDPHTLHRGLVVEMGRYRGAASPIKLSRTPATYRTAPPTLG
HHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
RDTRAVLDALGIDAATQARLADAGVLKEAKPMAT
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]