| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is narQ [H]
Identifier: 237813048
GI number: 237813048
Start: 2742113
End: 2744047
Strand: Direct
Name: narQ [H]
Synonym: GBP346_A2809
Alternate gene names: 237813048
Gene position: 2742113-2744047 (Clockwise)
Preceding gene: 237813047
Following gene: 237813049
Centisome position: 66.9
GC content: 71.47
Gene sequence:
>1935_bases ATGGCTCCCGCCCTCCCCGACTCCCCCGCTCCGTGGCGGCACCGCCTGTCGACGCGGATCGTCGCGCTGTCCGCGATCGC GTGGGCGCTCGTGCTCGCGATGGTGGGCGGCACGCTGTGGCTGTCCTGGCAGCTCGAGGGCGCGGGCGCGGCGATCAACG ACGCCGGCAGCCTGCGCATGCGCGCGACGCGCACCTACGTCGAGCTGTCGGGCGTGGGCACCGAGCCGCGCCGCCAGCTC GCGGTCGAGCTCGACGCGATCGACGGCACGCTCGCGCGGCTGCGCCGCGGCGATCCGTCGCGCCCCCTCTTTCTGCCGAA CACCACCGTCATCCAGCATCAGCTCGACATCGTCACCGATCGCTGGAACGCCGTGCTGCGCCCGCTCGCCGCCGGCGCGC TGACGAACGCGCCGCGCGCTGACGCGGCCGCCGCCTACCTCGTCGCGCTGCCCGGCTTCGTCGACGAGGCCGATCTGCTC GTGCGCGAGATCGAATCCGACAACGCGCGCAAGACGACGTGGCTGCGCCTGTCGCAGATCGGGCTCGGCCTGCTCGCGTG CTCGGGCACGGTCGCCGTCATCTACCTGCTGTTCCTGTGGATCATCCTGCCCGTGATGCAGTTGCGCGACGGCCTGAAGC GCATGGCCGCGCGCGAGTTCGCGGTGCGCCTGCCCGTGCAGACGCGCGACGAGTTCGGCGATCTCGCGCACGGCTTCAAC CGGATGGCAAGCGAATTGCAGGAGGTGTACGCGGGGCTCGAGGAGCGCGTGCAGCAAAAGACCGCGCAGCTCGCCGCGCA GAACCGCGAGCTGAGCGCGCTCTACGAGATCACCGCGTTCCTGAACCGCCCGCAGGCCGTCGACGAGATGTGCGCGGGCT TCCTGTCGCGCGCGATCGCGCAGTTCGACGCCGACGCGGGCAGCATCCGCGTCACCGATCCGACGGGCGAAAAGCTGCAT CTCGTGATTGCGGAGGGCCTGTCGACCGAGCTCACCGAGCTCGAACGCTGCATGCCCGTCGACGATTGCTTCTGCGGCAC CGTGACGCGCGCGGACACGGCCGTGCTGCACGACCTGCGCGGCAGCGCCGCGCGCGCGCCGACGCCGTGCTCGCGCGAGG GCTTCGCGGCCGTCGCGGTGTTCAAGGTGATGACCCAGGACGCGGTGCTCGGCTCGTTCTCGCTGCACTATCGCGACCCG TCGCGGCTGCCCGACGCCGAGCGGCGCGTGCTCGAGACGCTCGGCCGCCATCTCGGGATCGCGCTCGATCACGTGCGGCT GTCCGCGAGCGCGCGGCAGCTCGCGGTCGCCGAAGAGCGCAATCTCGTCGCGCAGGGCCTGCACGACAGCATCGCGCAAA GCCTCAATTTCGTGAACCTGCAGACGCAGATGCTCGCCGACGCGATCGCGCACGACAATCTCGCCGATGCGCGCGAGATC GTGCCGATGCTCAAGCACGGCGTCGAGCAGGGCTACGCGGACGTGCGCGAGCTGCTGCTCAACTTCCGCACGCGCTTGAC GCAGGGCGAGCTGAAAGCGGCGATCGAGGAAACGATCGCGCGCTTCGAGAAGCAGACGCGCATCGCGTGCGCGCTGAACT ATCGCGAGACGGGCGGCGCGCCGCTGCCGCCCGACGAGCAGTTGCAGGTGCTGTTCATCCTGCAGGAAGCGCTGTCGAAC GTGCGCAAGCATGCGCACGCGCGGCATGTCGCGGTCGATGTCGAGAACGGCGCCGCGTTCCGGCTGTCCGTCGCCGACGA CGGCTGCGGCTACGATCCGGCCGCGCTCGCCGCGCGCGCGGACACGCATGTCGGGCTCACGATCATGCGCGAGCGCGCCG CCCGCCTGCGCGCGACGCTCACGTTGACGGGCGCGCCGCAGCGCGGCGCGCGCGTCGAGCTGGTGCTGCCGGCCGACGCG CGACAGGCGGCATAG
Upstream 100 bases:
>100_bases CCGGGCGGGTGCGCCGCGATGCCTCACGTGCTCGAATGTCGCAGCGGGGGCGCAACATTCGGCAGGACAATTGTCATGTC CAAAAAAATCATGACGTGCT
Downstream 100 bases:
>100_bases CAACGAGAACGAGGACAATAATCATGACCATACGGGTACTGTTGATCGACGACCACACGCTCTTTCGCAGCGGCGTCAAG CTGCTGCTGCAGCGCCAGCC
Product: nitrate/nitrite sensor protein NarX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MAPALPDSPAPWRHRLSTRIVALSAIAWALVLAMVGGTLWLSWQLEGAGAAINDAGSLRMRATRTYVELSGVGTEPRRQL AVELDAIDGTLARLRRGDPSRPLFLPNTTVIQHQLDIVTDRWNAVLRPLAAGALTNAPRADAAAAYLVALPGFVDEADLL VREIESDNARKTTWLRLSQIGLGLLACSGTVAVIYLLFLWIILPVMQLRDGLKRMAAREFAVRLPVQTRDEFGDLAHGFN RMASELQEVYAGLEERVQQKTAQLAAQNRELSALYEITAFLNRPQAVDEMCAGFLSRAIAQFDADAGSIRVTDPTGEKLH LVIAEGLSTELTELERCMPVDDCFCGTVTRADTAVLHDLRGSAARAPTPCSREGFAAVAVFKVMTQDAVLGSFSLHYRDP SRLPDAERRVLETLGRHLGIALDHVRLSASARQLAVAEERNLVAQGLHDSIAQSLNFVNLQTQMLADAIAHDNLADAREI VPMLKHGVEQGYADVRELLLNFRTRLTQGELKAAIEETIARFEKQTRIACALNYRETGGAPLPPDEQLQVLFILQEALSN VRKHAHARHVAVDVENGAAFRLSVADDGCGYDPAALAARADTHVGLTIMRERAARLRATLTLTGAPQRGARVELVLPADA RQAA
Sequences:
>Translated_644_residues MAPALPDSPAPWRHRLSTRIVALSAIAWALVLAMVGGTLWLSWQLEGAGAAINDAGSLRMRATRTYVELSGVGTEPRRQL AVELDAIDGTLARLRRGDPSRPLFLPNTTVIQHQLDIVTDRWNAVLRPLAAGALTNAPRADAAAAYLVALPGFVDEADLL VREIESDNARKTTWLRLSQIGLGLLACSGTVAVIYLLFLWIILPVMQLRDGLKRMAAREFAVRLPVQTRDEFGDLAHGFN RMASELQEVYAGLEERVQQKTAQLAAQNRELSALYEITAFLNRPQAVDEMCAGFLSRAIAQFDADAGSIRVTDPTGEKLH LVIAEGLSTELTELERCMPVDDCFCGTVTRADTAVLHDLRGSAARAPTPCSREGFAAVAVFKVMTQDAVLGSFSLHYRDP SRLPDAERRVLETLGRHLGIALDHVRLSASARQLAVAEERNLVAQGLHDSIAQSLNFVNLQTQMLADAIAHDNLADAREI VPMLKHGVEQGYADVRELLLNFRTRLTQGELKAAIEETIARFEKQTRIACALNYRETGGAPLPPDEQLQVLFILQEALSN VRKHAHARHVAVDVENGAAFRLSVADDGCGYDPAALAARADTHVGLTIMRERAARLRATLTLTGAPQRGARVELVLPADA RQAA >Mature_643_residues APALPDSPAPWRHRLSTRIVALSAIAWALVLAMVGGTLWLSWQLEGAGAAINDAGSLRMRATRTYVELSGVGTEPRRQLA VELDAIDGTLARLRRGDPSRPLFLPNTTVIQHQLDIVTDRWNAVLRPLAAGALTNAPRADAAAAYLVALPGFVDEADLLV REIESDNARKTTWLRLSQIGLGLLACSGTVAVIYLLFLWIILPVMQLRDGLKRMAAREFAVRLPVQTRDEFGDLAHGFNR MASELQEVYAGLEERVQQKTAQLAAQNRELSALYEITAFLNRPQAVDEMCAGFLSRAIAQFDADAGSIRVTDPTGEKLHL VIAEGLSTELTELERCMPVDDCFCGTVTRADTAVLHDLRGSAARAPTPCSREGFAAVAVFKVMTQDAVLGSFSLHYRDPS RLPDAERRVLETLGRHLGIALDHVRLSASARQLAVAEERNLVAQGLHDSIAQSLNFVNLQTQMLADAIAHDNLADAREIV PMLKHGVEQGYADVRELLLNFRTRLTQGELKAAIEETIARFEKQTRIACALNYRETGGAPLPPDEQLQVLFILQEALSNV RKHAHARHVAVDVENGAAFRLSVADDGCGYDPAALAARADTHVGLTIMRERAARLRATLTLTGAPQRGARVELVLPADAR QAA
Specific function: Probable member of a two-component regulatory system. It is not known what protein it phosphorylates and in which regulatory pathway it acts, as the narL and other nar genes do not exist in H.influenzae [H]
COG id: COG3850
COG function: function code T; Signal transduction histidine kinase, nitrate/nitrite-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787474, Length=623, Percent_Identity=28.2504012841091, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI1788812, Length=502, Percent_Identity=27.6892430278884, Blast_Score=133, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR016380 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 70197; Mature: 70066
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPALPDSPAPWRHRLSTRIVALSAIAWALVLAMVGGTLWLSWQLEGAGAAINDAGSLRM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEECCCCCEEE RATRTYVELSGVGTEPRRQLAVELDAIDGTLARLRRGDPSRPLFLPNTTVIQHQLDIVTD EEEEEEEEEECCCCCHHHHHEEEEECCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHH RWNAVLRPLAAGALTNAPRADAAAAYLVALPGFVDEADLLVREIESDNARKTTWLRLSQI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHEEHHHH GLGLLACSGTVAVIYLLFLWIILPVMQLRDGLKRMAAREFAVRLPVQTRDEFGDLAHGFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RMASELQEVYAGLEERVQQKTAQLAAQNRELSALYEITAFLNRPQAVDEMCAGFLSRAIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QFDADAGSIRVTDPTGEKLHLVIAEGLSTELTELERCMPVDDCFCGTVTRADTAVLHDLR HHCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHC GSAARAPTPCSREGFAAVAVFKVMTQDAVLGSFSLHYRDPSRLPDAERRVLETLGRHLGI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCC ALDHVRLSASARQLAVAEERNLVAQGLHDSIAQSLNFVNLQTQMLADAIAHDNLADAREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VPMLKHGVEQGYADVRELLLNFRTRLTQGELKAAIEETIARFEKQTRIACALNYRETGGA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC PLPPDEQLQVLFILQEALSNVRKHAHARHVAVDVENGAAFRLSVADDGCGYDPAALAARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCHHHHHHCC DTHVGLTIMRERAARLRATLTLTGAPQRGARVELVLPADARQAA CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure APALPDSPAPWRHRLSTRIVALSAIAWALVLAMVGGTLWLSWQLEGAGAAINDAGSLRM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEECCCCCEEE RATRTYVELSGVGTEPRRQLAVELDAIDGTLARLRRGDPSRPLFLPNTTVIQHQLDIVTD EEEEEEEEEECCCCCHHHHHEEEEECCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHH RWNAVLRPLAAGALTNAPRADAAAAYLVALPGFVDEADLLVREIESDNARKTTWLRLSQI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHEEHHHH GLGLLACSGTVAVIYLLFLWIILPVMQLRDGLKRMAAREFAVRLPVQTRDEFGDLAHGFN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RMASELQEVYAGLEERVQQKTAQLAAQNRELSALYEITAFLNRPQAVDEMCAGFLSRAIA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QFDADAGSIRVTDPTGEKLHLVIAEGLSTELTELERCMPVDDCFCGTVTRADTAVLHDLR HHCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHC GSAARAPTPCSREGFAAVAVFKVMTQDAVLGSFSLHYRDPSRLPDAERRVLETLGRHLGI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCC ALDHVRLSASARQLAVAEERNLVAQGLHDSIAQSLNFVNLQTQMLADAIAHDNLADAREI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VPMLKHGVEQGYADVRELLLNFRTRLTQGELKAAIEETIARFEKQTRIACALNYRETGGA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCC PLPPDEQLQVLFILQEALSNVRKHAHARHVAVDVENGAAFRLSVADDGCGYDPAALAARA CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCHHHHHHCC DTHVGLTIMRERAARLRATLTLTGAPQRGARVELVLPADARQAA CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]