| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812964
Identifier: 237812964
GI number: 237812964
Start: 2655641
End: 2656111
Strand: Reverse
Name: 237812964
Synonym: GBP346_A2724
Alternate gene names: NA
Gene position: 2656111-2655641 (Counterclockwise)
Preceding gene: 237812965
Following gene: 237812963
Centisome position: 64.81
GC content: 63.91
Gene sequence:
>471_bases ATGCCGTCCGTCGCGCAGAAGGTCTTCGAGTTCGTGCCGATTCAAGAATCGTGGACGACCAAGCAGATCGTGGCGCAGGT GAAAGCCACGACCAAGGCGCAAATCGATTCGCGAACGGCGGACAACTGCCTTGCGCGGTTGAGAGATGCCGGGCTCGTCC GCGAGGTGACGCGTGGCGAATTTCGACGCGTCCGGCTCACGACGTCGTGCGCCTCGGCCGATACGGGCGATGAGGAGGAA CCGGACACTCGCGCGCTCGTGAGTGAAGCGCCGGGCAAGCGCGACAGTAGTGCATCGCCGATTGATTTGCTGTCGGGCAT CGCGAACCGTCTGACAGCGACCGTGGAATCGATACGCGAGATCGCCGTCGAGATCGAAACCGCCGCGCTCGTGATCGAGG AGCAGCAGGCGGCGAACGGGCGCGAGGCCGACAAGCTGCGCCAGTTGCAAGCGCTGCTCAAGGCACTGTAG
Upstream 100 bases:
>100_bases CAACGCATACAGGAGGGTTTATGCAAAAGGGTATTTCGACGGTCTCAAAGCGGCGGGGGCAGGCTTGAACCCCGGCCGCC AGCAATCCATTCTGCGCGGT
Downstream 100 bases:
>100_bases CGACGCGACCCAAGTTGCTTTGCGTTCGCCGCATCGCATCTTTCCCCCATTTCTTTCCCCTCGCCGTGCGTTCGGATTCG CGCGCGCGAGGGACTGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MPSVAQKVFEFVPIQESWTTKQIVAQVKATTKAQIDSRTADNCLARLRDAGLVREVTRGEFRRVRLTTSCASADTGDEEE PDTRALVSEAPGKRDSSASPIDLLSGIANRLTATVESIREIAVEIETAALVIEEQQAANGREADKLRQLQALLKAL
Sequences:
>Translated_156_residues MPSVAQKVFEFVPIQESWTTKQIVAQVKATTKAQIDSRTADNCLARLRDAGLVREVTRGEFRRVRLTTSCASADTGDEEE PDTRALVSEAPGKRDSSASPIDLLSGIANRLTATVESIREIAVEIETAALVIEEQQAANGREADKLRQLQALLKAL >Mature_155_residues PSVAQKVFEFVPIQESWTTKQIVAQVKATTKAQIDSRTADNCLARLRDAGLVREVTRGEFRRVRLTTSCASADTGDEEEP DTRALVSEAPGKRDSSASPIDLLSGIANRLTATVESIREIAVEIETAALVIEEQQAANGREADKLRQLQALLKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16991; Mature: 16860
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVAQKVFEFVPIQESWTTKQIVAQVKATTKAQIDSRTADNCLARLRDAGLVREVTRGE CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FRRVRLTTSCASADTGDEEEPDTRALVSEAPGKRDSSASPIDLLSGIANRLTATVESIRE HHHHEEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IAVEIETAALVIEEQQAANGREADKLRQLQALLKAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure PSVAQKVFEFVPIQESWTTKQIVAQVKATTKAQIDSRTADNCLARLRDAGLVREVTRGE CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FRRVRLTTSCASADTGDEEEPDTRALVSEAPGKRDSSASPIDLLSGIANRLTATVESIRE HHHHEEHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IAVEIETAALVIEEQQAANGREADKLRQLQALLKAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA