| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812962
Identifier: 237812962
GI number: 237812962
Start: 2652224
End: 2652811
Strand: Reverse
Name: 237812962
Synonym: GBP346_A2722
Alternate gene names: NA
Gene position: 2652811-2652224 (Counterclockwise)
Preceding gene: 237812963
Following gene: 237812961
Centisome position: 64.73
GC content: 62.24
Gene sequence:
>588_bases ATGATGGATCTGATGGAGCGGGCGGGAATCGCGATGAGCGTGCGTGGTCAGTTCACCGACCCGATTGCCGATCCGAAAGT TACTTTGGGCGCGCTCGCCTTTGCGAACGATCTCGGTCGCTCGCTTTTCCGCATCAAGGCCGGGCAGCAAGTGACGCGGG AATCGATTCGGCACGCGACGCTGCTGCTCGCGCAGATGATTCGAACGTCGGGGCGATTCAAGCGCTCGCGGTTTACCGGT CTGAAGCGCGATGAGCGTCGCGACCAACGCGCGGGGCACTCCGTCGAGCGGGCGAAGGTGGATATCATCGAGCGTTTCGC GCTTCGCTTGCTCGATGAGTGGGTCAATGATCAGTGCATGCGCTGCGAAGGTCGCGGTGTCGTGCGGACAGGCGGGCGGT ACATCTGCCCCGACTGTGCGGGGTCGGGGCGTCGACCGATCGACGATGCAGCACGCGCGCACGCGCTCGGCATCCCGCTT GATGAGTATCGGCGTCACTGGTCGCGACGCTTTCATGACATGCTCGCGCTCCTCGACAACGTGAAGGGTTCAACGTTCGA CACAATGAGTCGACAATTGCGAGGATGA
Upstream 100 bases:
>100_bases GCGACATGCGCGACGTGAGCGGCGCATGTCGCAGGCGCGCGCGCCCCTGCAAGCCTTTTCCCTTGGGACATTGGGACGTT AGGACGTTAAGGAGAAAGCG
Downstream 100 bases:
>100_bases ACGGACTTCCATTTCAAGAGTGAATGCCGTAAACTTCGGTCATCCTTTACCGCGTCACTGGATGATCGCTGGCACCGCGC GTTAGTCGTGCAAACCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHATLLLAQMIRTSGRFKRSRFTG LKRDERRDQRAGHSVERAKVDIIERFALRLLDEWVNDQCMRCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPL DEYRRHWSRRFHDMLALLDNVKGSTFDTMSRQLRG
Sequences:
>Translated_195_residues MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHATLLLAQMIRTSGRFKRSRFTG LKRDERRDQRAGHSVERAKVDIIERFALRLLDEWVNDQCMRCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPL DEYRRHWSRRFHDMLALLDNVKGSTFDTMSRQLRG >Mature_195_residues MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHATLLLAQMIRTSGRFKRSRFTG LKRDERRDQRAGHSVERAKVDIIERFALRLLDEWVNDQCMRCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPL DEYRRHWSRRFHDMLALLDNVKGSTFDTMSRQLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22187; Mature: 22187
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHAT CCCHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLLAQMIRTSGRFKRSRFTGLKRDERRDQRAGHSVERAKVDIIERFALRLLDEWVNDQCM HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHH RCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPLDEYRRHWSRRFHDMLALLDN HCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VKGSTFDTMSRQLRG CCCCHHHHHHHHHCC >Mature Secondary Structure MMDLMERAGIAMSVRGQFTDPIADPKVTLGALAFANDLGRSLFRIKAGQQVTRESIRHAT CCCHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLLAQMIRTSGRFKRSRFTGLKRDERRDQRAGHSVERAKVDIIERFALRLLDEWVNDQCM HHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHH RCEGRGVVRTGGRYICPDCAGSGRRPIDDAARAHALGIPLDEYRRHWSRRFHDMLALLDN HCCCCCEEECCCEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VKGSTFDTMSRQLRG CCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA