| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812952
Identifier: 237812952
GI number: 237812952
Start: 2643557
End: 2644087
Strand: Reverse
Name: 237812952
Synonym: GBP346_A2712
Alternate gene names: NA
Gene position: 2644087-2643557 (Counterclockwise)
Preceding gene: 237812953
Following gene: 237812951
Centisome position: 64.51
GC content: 66.1
Gene sequence:
>531_bases ATGAACCGACTGAAAGTCGAAATCGACGTCGGCGCGGTCACGGCCGTCTTGCAGGGCCTGTCGCCGTCCGCGATGCAGGC CGCGTGGCGGCGCACGCTGCGCAAGACGGCCGCATGGATCAAGAGCCAGACGGCGAAGGAAGTCAGCGCGGCGACGCGTA TTCCGCAGAAGACGATCCGCCGCCGGCTGTATTTCTTCCTGCGGTCGGCCGATACCGGCAAGGTGTGGCTCGGCCTGAAC CCGATCGAGGCGCACCGCCTCGGCTCGGTGGCGAAGACGCGCAAGGGCATGCGCGCCGGCCGCACGTCGTTCGAGGGCGC ATGGCGGCAGTCGAAACGGCAACCGGACGGGCCGATCTTCGAGCGCGTCGGGAAGGCACGGCTGCCGTACCGCGTCGTGA CGGTCAATTGGCACGAGACAGGCGAGCCGGCGTTTCGCCGCGCGGCGAAGGCTTGCGAGGAACGGCTCTTGACGATCCTG AGGCAGGAAGTGAACTACGAACTACAAAAGGTAATGGGACGTGCTCGATAA
Upstream 100 bases:
>100_bases ATCCAGCCGGGCAGCGTCGTGACTGCGCGCAGCGGGCGCTATCGCGTCGTCGAGGCGCAGCCGGACGGCACGGGCTGGAC GATCCTGACACTGCAATGAC
Downstream 100 bases:
>100_bases CCTCAAATTGCTGCACGACGCGATCGTGAAGGGCCTGCGAGAAGCGCTGCCGACCTTCGAGCGGATCGAAGCGTATCCGA AGATCGGTGCGCAGATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIRRRLYFFLRSADTGKVWLGLN PIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIFERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTIL RQEVNYELQKVMGRAR
Sequences:
>Translated_176_residues MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIRRRLYFFLRSADTGKVWLGLN PIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIFERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTIL RQEVNYELQKVMGRAR >Mature_176_residues MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIRRRLYFFLRSADTGKVWLGLN PIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIFERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTIL RQEVNYELQKVMGRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20043; Mature: 20043
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIR CCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RRLYFFLRSADTGKVWLGLNPIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIF HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH ERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTILRQEVNYELQKVMGRAR HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNRLKVEIDVGAVTAVLQGLSPSAMQAAWRRTLRKTAAWIKSQTAKEVSAATRIPQKTIR CCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RRLYFFLRSADTGKVWLGLNPIEAHRLGSVAKTRKGMRAGRTSFEGAWRQSKRQPDGPIF HHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH ERVGKARLPYRVVTVNWHETGEPAFRRAAKACEERLLTILRQEVNYELQKVMGRAR HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA