| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812953
Identifier: 237812953
GI number: 237812953
Start: 2644089
End: 2644379
Strand: Reverse
Name: 237812953
Synonym: GBP346_A2713
Alternate gene names: NA
Gene position: 2644379-2644089 (Counterclockwise)
Preceding gene: 237812954
Following gene: 237812952
Centisome position: 64.52
GC content: 68.73
Gene sequence:
>291_bases ATGGCGTTTCACGATCTGATGACGGACGTCGACGCGGCCGTGCTGCGGGATCTGGGCGACGACGATGTCTTCGTCGACGG CCGGCCCGTGCGCGGCATGTTCAATGCGCCGTGGCTCGGTCCCGATCTCGGCTCGCAACGCACGAACCTCGTCGCGCCGA TGTTGCACGTGATCGACGCGGACGCCGCCGGCATCCAGCCGGGCAGCGTCGTGACTGCGCGCAGCGGGCGCTATCGCGTC GTCGAGGCGCAGCCGGACGGCACGGGCTGGACGATCCTGACACTGCAATGA
Upstream 100 bases:
>100_bases AATCATGCCGTTCAACAAGGGCGTCGAGATCGAGGCGCAGTCGAACCCGATCCATCTGTGTACGCGCCCGCGCGCGTGCA TTCGTCTGAAGGCGTGACGC
Downstream 100 bases:
>100_bases CATGAACCGACTGAAAGTCGAAATCGACGTCGGCGCGGTCACGGCCGTCTTGCAGGGCCTGTCGCCGTCCGCGATGCAGG CCGCGTGGCGGCGCACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDADAAGIQPGSVVTARSGRYRV VEAQPDGTGWTILTLQ
Sequences:
>Translated_96_residues MAFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDADAAGIQPGSVVTARSGRYRV VEAQPDGTGWTILTLQ >Mature_95_residues AFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDADAAGIQPGSVVTARSGRYRVV EAQPDGTGWTILTLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10319; Mature: 10188
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDA CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DAAGIQPGSVVTARSGRYRVVEAQPDGTGWTILTLQ CCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEC >Mature Secondary Structure AFHDLMTDVDAAVLRDLGDDDVFVDGRPVRGMFNAPWLGPDLGSQRTNLVAPMLHVIDA CHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DAAGIQPGSVVTARSGRYRVVEAQPDGTGWTILTLQ CCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA