| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812951
Identifier: 237812951
GI number: 237812951
Start: 2643034
End: 2643567
Strand: Reverse
Name: 237812951
Synonym: GBP346_A2711
Alternate gene names: NA
Gene position: 2643567-2643034 (Counterclockwise)
Preceding gene: 237812952
Following gene: 237812950
Centisome position: 64.5
GC content: 65.54
Gene sequence:
>534_bases GTGCTCGATAACCTCAAATTGCTGCACGACGCGATCGTGAAGGGCCTGCGAGAAGCGCTGCCGACCTTCGAGCGGATCGA AGCGTATCCGAAGATCGGTGCGCAGATCCGGACGCCGCTGATCGCCGTCGAGCTGTCCGAAATGGAGCCCGGACACGACG ACGGGACCGGCTGCATTTCGCTGATCGCGCGCATGCAGGCGCGCATCATCGTCGATCCATACGGCGCGGAACACGAGCTG CATGTGCGCGAAATCGCCGCGCGTCTCGCGCTCGCGGTTCACATGCAGACGTGGGGCTTGCCGATCGCGCCCGGCAGGGT GGTTCAGGTTGGCGAAGACCCGTTCCGCCCGCAGCTCGACACGTACCTCGTGTGGCTTGTCGAATGGACGCACGAATTCG GCATCGGCGGGGAGCTCGAGACGATCCCGGACGGCAGCACGCTCGTATGGGGCGTCGATCCGTCGACGGGGCCGGGCAAC GAAAGCAGCTATTGGGATCCGGCGCAGGACGCGCCGGCCGACTATCCGGAGTGA
Upstream 100 bases:
>100_bases GGCGAGCCGGCGTTTCGCCGCGCGGCGAAGGCTTGCGAGGAACGGCTCTTGACGATCCTGAGGCAGGAAGTGAACTACGA ACTACAAAAGGTAATGGGAC
Downstream 100 bases:
>100_bases CGATGCTCGAGTATGAAATCGGCGAGATCGACCGGCGGCTCGCGTGTCTCGTGCAGCAAGGCACGGTCGACGCGGTGTCG TACGACCCGCCGCGATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCISLIARMQARIIVDPYGAEHEL HVREIAARLALAVHMQTWGLPIAPGRVVQVGEDPFRPQLDTYLVWLVEWTHEFGIGGELETIPDGSTLVWGVDPSTGPGN ESSYWDPAQDAPADYPE
Sequences:
>Translated_177_residues MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCISLIARMQARIIVDPYGAEHEL HVREIAARLALAVHMQTWGLPIAPGRVVQVGEDPFRPQLDTYLVWLVEWTHEFGIGGELETIPDGSTLVWGVDPSTGPGN ESSYWDPAQDAPADYPE >Mature_177_residues MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCISLIARMQARIIVDPYGAEHEL HVREIAARLALAVHMQTWGLPIAPGRVVQVGEDPFRPQLDTYLVWLVEWTHEFGIGGELETIPDGSTLVWGVDPSTGPGN ESSYWDPAQDAPADYPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19528; Mature: 19528
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCIS CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCHHHHH LIARMQARIIVDPYGAEHELHVREIAARLALAVHMQTWGLPIAPGRVVQVGEDPFRPQLD HHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHH TYLVWLVEWTHEFGIGGELETIPDGSTLVWGVDPSTGPGNESSYWDPAQDAPADYPE HHHHHEEHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDNLKLLHDAIVKGLREALPTFERIEAYPKIGAQIRTPLIAVELSEMEPGHDDGTGCIS CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCEEEEEECCCCCCCCCCHHHHH LIARMQARIIVDPYGAEHELHVREIAARLALAVHMQTWGLPIAPGRVVQVGEDPFRPQLD HHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHH TYLVWLVEWTHEFGIGGELETIPDGSTLVWGVDPSTGPGNESSYWDPAQDAPADYPE HHHHHEEHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA