| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812950
Identifier: 237812950
GI number: 237812950
Start: 2642351
End: 2643031
Strand: Reverse
Name: 237812950
Synonym: GBP346_A2710
Alternate gene names: NA
Gene position: 2643031-2642351 (Counterclockwise)
Preceding gene: 237812951
Following gene: 237812949
Centisome position: 64.49
GC content: 70.19
Gene sequence:
>681_bases ATGCTCGAGTATGAAATCGGCGAGATCGACCGGCGGCTCGCGTGTCTCGTGCAGCAAGGCACGGTCGACGCGGTGTCGTA CGACCCGCCGCGATGCCGCGTGCGGGTCGGCGATTGGGTCAGTGACTGGTTGCCGTGGTTCACGGTCGCGGCGGGCGCGG TGCGCTTCTGGCGGCCGCCGTCCGAAGGCGAGCAGGCATCCGTCCTGTCCGCGTCGGGCGAGCTGTCGAGCGCGTACGCG GTGCCGGGCTACTACGCCGAGCAGCACGGCGGGGCAGCACGGCGCAGCCCGAACGAAACGGCGTTCGATTTTCCGGATGG GGCGTCGCAGGTCTATGACCACGCGTCGCACGAGTACCGGGTCGAAGTGCCGGCGGGCGGGCGCATCGTTTTCCGCATCG GCGAGACGGAGCTGGAGCTACGGGCGGACGGCGTGACGTTGCGCACCGAGAAACTGCTCGGCGACGTTCCGGACTCGACG TTCACGGGCAACACGACGACCGGGCAGCGCCTGACGTTCAACGGCGGCATGCAGGGCCGAGCAGGCGCGAACGGCGGGCC GGCGGTGGAAGTCGACGGCGGTGCTCGCTACACGGGCGATGTCGAGATCGGCGGCAAGTCGTTCCTCGGCCACAGCCACA GGGAGCAGGGCGACGGAGCGCCCGTGTCGCCGCCGCTGTAG
Upstream 100 bases:
>100_bases GCACGCTCGTATGGGGCGTCGATCCGTCGACGGGGCCGGGCAACGAAAGCAGCTATTGGGATCCGGCGCAGGACGCGCCG GCCGACTATCCGGAGTGACG
Downstream 100 bases:
>100_bases CCGGTCGGTCTTCCAAGTCACTTTGCCCCGCAATCGCGGGGCTTCGCATTTTTGGAGTCAGCACATGGCAAAAGAACCAT CGCACACGAGTGCGCCGCTC
Product: phage baseplate assembly protein V
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Pyocin R2_PP; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly; Prophage LambdaW5 Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Baseplate Assembly Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPPSEGEQASVLSASGELSSAYA VPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYRVEVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDST FTGNTTTGQRLTFNGGMQGRAGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL
Sequences:
>Translated_226_residues MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPPSEGEQASVLSASGELSSAYA VPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYRVEVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDST FTGNTTTGQRLTFNGGMQGRAGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL >Mature_226_residues MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPPSEGEQASVLSASGELSSAYA VPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYRVEVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDST FTGNTTTGQRLTFNGGMQGRAGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24201; Mature: 24201
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPP CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHEECCCC SEGEQASVLSASGELSSAYAVPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYR CCCCCEEEEECCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE VEVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDSTFTGNTTTGQRLTFNGGMQGR EEECCCCEEEEEECCCEEEEEECCEEEEHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC AGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL CCCCCCCEEEECCCCEEECEEEECCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLEYEIGEIDRRLACLVQQGTVDAVSYDPPRCRVRVGDWVSDWLPWFTVAAGAVRFWRPP CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHEECCCC SEGEQASVLSASGELSSAYAVPGYYAEQHGGAARRSPNETAFDFPDGASQVYDHASHEYR CCCCCEEEEECCCCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEE VEVPAGGRIVFRIGETELELRADGVTLRTEKLLGDVPDSTFTGNTTTGQRLTFNGGMQGR EEECCCCEEEEEECCCEEEEEECCEEEEHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCC AGANGGPAVEVDGGARYTGDVEIGGKSFLGHSHREQGDGAPVSPPL CCCCCCCEEEECCCCEEECEEEECCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA