| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812881
Identifier: 237812881
GI number: 237812881
Start: 2574679
End: 2575458
Strand: Reverse
Name: 237812881
Synonym: GBP346_A2640
Alternate gene names: NA
Gene position: 2575458-2574679 (Counterclockwise)
Preceding gene: 237812882
Following gene: 237812880
Centisome position: 62.84
GC content: 66.28
Gene sequence:
>780_bases GTGAAGACATTCAGAGAGAAGGTTCGGGCCAGATGGCCGCATTACGACGACCGGCGCGGCGTGTTCCTGCCCGGCGCGAC GCCCGACGAGATGCGGCGCGTCGCGTGCGAGACGCAGCTCGACTGCAAGCTGACGTGCCGCTCGCATCTGCACGCGTATC GCGAGTACCTGCCGAAGCTGTATTTCGAGGGCAACGTCGCCGATTGCGATTTCGATGCGCTGCCGGCGCGCTACGTGATC AAGCCGCGCTGCCAGACGGGTGTGCTGATGCTGATGGACGACGGCGTCGACCTGAAGACGGGCAGGGCGGCGGGCCATGA CGAGATCCGCGCGTTCTTCGCGCGGCAGTGGTGCTACCGCGGGTTGAACAACGACGTGCTCGTCGAGGAGATGATCGAGA ACCGCGACGGCTCGCCGTGCGTGTCCCAGTTCAAGTGCCTGACGTTTCACGGCCGCGTCGAATACATCCACTACGTGACC GTGGGCTACGACCTCGGCTGCGTCGCGTACGACTACGACCGCGACTGGAACCGCGTCGCGCTGTATCACAGCGCGCAGCC CGTCGAGCGCGGCATCGCGCGGCCCGACACGTTCCCGATGGTGATCGAGTTGGCCGAGCGCCTCGCCGATTACTACCGGC ACTGGACGGGCATCGAGCACGTGCGTGTCGACCTGTTCGATTCGGACAAGGGGCCGGTGTTCGGCGAGTACGCGGGCGGC ACGAACGGCGGCGAAGGGTTCACCGAAGAGGCGCAGGCGTTGCTGGGGGCGCTGTGGTGA
Upstream 100 bases:
>100_bases GGCGTCGCCGACTGGAGCGAGCTCGAGGACTATCGGCTCGGCAGGCGCGAGAGCTGGGTCGCGCGCGCGCGGCGCGCGTG AGAATCGAGAGGAGAGCGTC
Downstream 100 bases:
>100_bases GCGGCGCGAGCGGGAGCTCGCCGTCGCCCGATCGGGGCCGTGACGCGATGAGCGCGTCCGCGCCTGCGTCGCGCTCGTCC GAGCGCCGGCCGGTGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKTFREKVRARWPHYDDRRGVFLPGATPDEMRRVACETQLDCKLTCRSHLHAYREYLPKLYFEGNVADCDFDALPARYVI KPRCQTGVLMLMDDGVDLKTGRAAGHDEIRAFFARQWCYRGLNNDVLVEEMIENRDGSPCVSQFKCLTFHGRVEYIHYVT VGYDLGCVAYDYDRDWNRVALYHSAQPVERGIARPDTFPMVIELAERLADYYRHWTGIEHVRVDLFDSDKGPVFGEYAGG TNGGEGFTEEAQALLGALW
Sequences:
>Translated_259_residues MKTFREKVRARWPHYDDRRGVFLPGATPDEMRRVACETQLDCKLTCRSHLHAYREYLPKLYFEGNVADCDFDALPARYVI KPRCQTGVLMLMDDGVDLKTGRAAGHDEIRAFFARQWCYRGLNNDVLVEEMIENRDGSPCVSQFKCLTFHGRVEYIHYVT VGYDLGCVAYDYDRDWNRVALYHSAQPVERGIARPDTFPMVIELAERLADYYRHWTGIEHVRVDLFDSDKGPVFGEYAGG TNGGEGFTEEAQALLGALW >Mature_259_residues MKTFREKVRARWPHYDDRRGVFLPGATPDEMRRVACETQLDCKLTCRSHLHAYREYLPKLYFEGNVADCDFDALPARYVI KPRCQTGVLMLMDDGVDLKTGRAAGHDEIRAFFARQWCYRGLNNDVLVEEMIENRDGSPCVSQFKCLTFHGRVEYIHYVT VGYDLGCVAYDYDRDWNRVALYHSAQPVERGIARPDTFPMVIELAERLADYYRHWTGIEHVRVDLFDSDKGPVFGEYAGG TNGGEGFTEEAQALLGALW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29812; Mature: 29812
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFREKVRARWPHYDDRRGVFLPGATPDEMRRVACETQLDCKLTCRSHLHAYREYLPKL CCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHE YFEGNVADCDFDALPARYVIKPRCQTGVLMLMDDGVDLKTGRAAGHDEIRAFFARQWCYR EECCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GLNNDVLVEEMIENRDGSPCVSQFKCLTFHGRVEYIHYVTVGYDLGCVAYDYDRDWNRVA CCCCCHHHHHHHHCCCCCHHHHHCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCCEEE LYHSAQPVERGIARPDTFPMVIELAERLADYYRHWTGIEHVRVDLFDSDKGPVFGEYAGG EEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCC TNGGEGFTEEAQALLGALW CCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKTFREKVRARWPHYDDRRGVFLPGATPDEMRRVACETQLDCKLTCRSHLHAYREYLPKL CCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHE YFEGNVADCDFDALPARYVIKPRCQTGVLMLMDDGVDLKTGRAAGHDEIRAFFARQWCYR EECCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC GLNNDVLVEEMIENRDGSPCVSQFKCLTFHGRVEYIHYVTVGYDLGCVAYDYDRDWNRVA CCCCCHHHHHHHHCCCCCHHHHHCEEEEEECCEEEEEEEEECCCCCEEEEECCCCCCEEE LYHSAQPVERGIARPDTFPMVIELAERLADYYRHWTGIEHVRVDLFDSDKGPVFGEYAGG EEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEECCCC TNGGEGFTEEAQALLGALW CCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA