| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812880
Identifier: 237812880
GI number: 237812880
Start: 2573597
End: 2574685
Strand: Reverse
Name: 237812880
Synonym: GBP346_A2639
Alternate gene names: NA
Gene position: 2574685-2573597 (Counterclockwise)
Preceding gene: 237812881
Following gene: 237812879
Centisome position: 62.82
GC content: 74.1
Gene sequence:
>1089_bases GTGGTGAGCGGCGCGAGCGGGAGCTCGCCGTCGCCCGATCGGGGCCGTGACGCGATGAGCGCGTCCGCGCCTGCGTCGCG CTCGTCCGAGCGCCGGCCGGTGCGCGTGCTGCGTGTGCTCGCGCGCCGCCACGTCGATTCGACGCGGATGGTCCGGCCGC GGGATTTCGACATGGCGCTCGTCGCGCAGGTGCCGGGCATGTCCGACATCGGCGACGGCGAGCGCTACGTGCCGCTGTGC GTCGACTGGCGCGACGCGCGGCTTTTCCTGAGCCGCTGGGACGACGACTGCGCGATGACCGACGTGCCGTTTCTCTACCA GCGTCAACGGCGCACCGCGCGGCAACTGCTCGACGTGCCGTTCGAGCAGTTGGAGGCGCCCGGCCGCGCGGCGCGCATGA CGCCGATCTTCATCTTCTCGGTGGGGCGCTGCGGCTCGACGCTGCTGTCGCGCTTGCTCGCGGCGGTGGGCGAGCAAGCG GTGTCGGAGCCGGACGTGCTCACGAGCGTCGCGCATTTCGACGACGCGGCCGAGCGCGCCGCGGCGCTGCCTGCGCGCGA GCGGATCGTGCAGAGCTGCGTCGCGGCGTTCGAGCCCGCGTGCGGGCCCGCGCCGATCATCAAGCTGCGCGCGCGCTGCA ATCGCGCGGTGGACGTGTTCCTGAACGCGATGCCGCACGCGCGCTACGTGTTCATGTGCCGCAATCGCGACGACTGGGTG CGCTCGAGCTCGCGCGCGTTCGGCGACAGCGGCGAGGCGCTCGCCGAGCTGCTCAAGGCGTCGGTCGAGGCGTTCGACCG GATGCACGCGACCCGCGTCGATCCGCTGCTCGTCTGGTACGAGGATCTGCTCGCGGATCCGCTCGCGGCGCTACGGCGCA TCCTGCGCGCGCGCGACGATCTGGACGCGCACCGCGCCGCCGTCGAGCGCGCGCTGCGCGCCGACGCGCAGGAAGGCTCG GGCCTGTCGCGCGCGTCGCTCGCGGCGCGCACGGGCGATGCCGGCGCGCTCGCCGCGTTCGACGCGCGCTGGCGCGAGAT CCGGCCGGAGGCGCTGTTGCGCGAGCACGGCTTGGCGCGCCTGCGCTGA
Upstream 100 bases:
>100_bases TGTTCGATTCGGACAAGGGGCCGGTGTTCGGCGAGTACGCGGGCGGCACGAACGGCGGCGAAGGGTTCACCGAAGAGGCG CAGGCGTTGCTGGGGGCGCT
Downstream 100 bases:
>100_bases ACCCTTGTTTCGAACAGGAATGGCGATGAATCTCGACAACCAGGTGCTGGAAAACCGCAAGCGGGTGCTGAAGATGCTGC ACGGCGCCGACGGCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR
Sequences:
>Translated_362_residues MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR >Mature_362_residues MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40030; Mature: 40030
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMAL CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC LR CC >Mature Secondary Structure MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMAL CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA