Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237812880

Identifier: 237812880

GI number: 237812880

Start: 2573597

End: 2574685

Strand: Reverse

Name: 237812880

Synonym: GBP346_A2639

Alternate gene names: NA

Gene position: 2574685-2573597 (Counterclockwise)

Preceding gene: 237812881

Following gene: 237812879

Centisome position: 62.82

GC content: 74.1

Gene sequence:

>1089_bases
GTGGTGAGCGGCGCGAGCGGGAGCTCGCCGTCGCCCGATCGGGGCCGTGACGCGATGAGCGCGTCCGCGCCTGCGTCGCG
CTCGTCCGAGCGCCGGCCGGTGCGCGTGCTGCGTGTGCTCGCGCGCCGCCACGTCGATTCGACGCGGATGGTCCGGCCGC
GGGATTTCGACATGGCGCTCGTCGCGCAGGTGCCGGGCATGTCCGACATCGGCGACGGCGAGCGCTACGTGCCGCTGTGC
GTCGACTGGCGCGACGCGCGGCTTTTCCTGAGCCGCTGGGACGACGACTGCGCGATGACCGACGTGCCGTTTCTCTACCA
GCGTCAACGGCGCACCGCGCGGCAACTGCTCGACGTGCCGTTCGAGCAGTTGGAGGCGCCCGGCCGCGCGGCGCGCATGA
CGCCGATCTTCATCTTCTCGGTGGGGCGCTGCGGCTCGACGCTGCTGTCGCGCTTGCTCGCGGCGGTGGGCGAGCAAGCG
GTGTCGGAGCCGGACGTGCTCACGAGCGTCGCGCATTTCGACGACGCGGCCGAGCGCGCCGCGGCGCTGCCTGCGCGCGA
GCGGATCGTGCAGAGCTGCGTCGCGGCGTTCGAGCCCGCGTGCGGGCCCGCGCCGATCATCAAGCTGCGCGCGCGCTGCA
ATCGCGCGGTGGACGTGTTCCTGAACGCGATGCCGCACGCGCGCTACGTGTTCATGTGCCGCAATCGCGACGACTGGGTG
CGCTCGAGCTCGCGCGCGTTCGGCGACAGCGGCGAGGCGCTCGCCGAGCTGCTCAAGGCGTCGGTCGAGGCGTTCGACCG
GATGCACGCGACCCGCGTCGATCCGCTGCTCGTCTGGTACGAGGATCTGCTCGCGGATCCGCTCGCGGCGCTACGGCGCA
TCCTGCGCGCGCGCGACGATCTGGACGCGCACCGCGCCGCCGTCGAGCGCGCGCTGCGCGCCGACGCGCAGGAAGGCTCG
GGCCTGTCGCGCGCGTCGCTCGCGGCGCGCACGGGCGATGCCGGCGCGCTCGCCGCGTTCGACGCGCGCTGGCGCGAGAT
CCGGCCGGAGGCGCTGTTGCGCGAGCACGGCTTGGCGCGCCTGCGCTGA

Upstream 100 bases:

>100_bases
TGTTCGATTCGGACAAGGGGCCGGTGTTCGGCGAGTACGCGGGCGGCACGAACGGCGGCGAAGGGTTCACCGAAGAGGCG
CAGGCGTTGCTGGGGGCGCT

Downstream 100 bases:

>100_bases
ACCCTTGTTTCGAACAGGAATGGCGATGAATCTCGACAACCAGGTGCTGGAAAACCGCAAGCGGGTGCTGAAGATGCTGC
ACGGCGCCGACGGCGGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC
VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA
VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV
RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS
GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR

Sequences:

>Translated_362_residues
MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC
VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA
VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV
RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS
GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR
>Mature_362_residues
MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMALVAQVPGMSDIGDGERYVPLC
VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA
VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV
RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS
GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40030; Mature: 40030

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMAL
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH
VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP
HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA
HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDD
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC
LR
CC
>Mature Secondary Structure
MVSGASGSSPSPDRGRDAMSASAPASRSSERRPVRVLRVLARRHVDSTRMVRPRDFDMAL
CCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH
VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP
HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC
FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA
HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH
RSSSRAFGDSGEALAELLKASVEAFDRMHATRVDPLLVWYEDLLADPLAALRRILRARDD
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA