| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is ytfP [C]
Identifier: 237812846
GI number: 237812846
Start: 2537627
End: 2538085
Strand: Reverse
Name: ytfP [C]
Synonym: GBP346_A2600
Alternate gene names: 237812846
Gene position: 2538085-2537627 (Counterclockwise)
Preceding gene: 237812847
Following gene: 237812843
Centisome position: 61.93
GC content: 69.28
Gene sequence:
>459_bases GTGACGCGGCGGCGTGCCGGTTCGATGGCACGATTGAAACAAGGAAGGAAGATGCGCTACGTATTCTGCTACGGGACCCT GAGAGCGGGCGAGATCAACGACATCGGCCGGGCGGCGGCGACGCACGGCATCGCGGCGCCGAGGCTCGTCGGCGCGGTGG CGGTGGCGGGGCGCCTGTATGACTTCGGCAACTATCCGGGGATGGTCGCGGGCAGTGGCCGCGATCTCGTCTGGGGCGAC GTCTACGCGATCGACGAGCGGCTCGTGCCGGTGCTCGACGAGATCGAGGAAGTGTACCCGGGCGTCGAGGGGCTGTTCGT GCGGCAGCGGGCGTCGGTCGAACTCGGCGGGCGCCGGTACGATTGCCTGTATTACCCGGTCGGTGCGCACGCGATCGCGG ACAAGCCGCGCATCGAGTCGGGCGACTGGGTGCAGTATCGGCGCGCGCGCACCGCGTGA
Upstream 100 bases:
>100_bases GCGACGCGCCTGTCGACGTACGCGGTACGCGCATCGTGCCGGGCGACTGGATCTACGCGGATGCCGACGGCGTCCTCGTC AGCGACGACGCGCTGCTCGA
Downstream 100 bases:
>100_bases CGCGTAGCCGCGGCGACGCGCGGGCGAGCGCGCCGAATGCCGTCGCGTACAGGCGCGGCGGCGCGAGCCGTCGGCGATTC GGCGGTTCGATTCGTGCGAT
Product: AIG2 family protein
Products: NA
Alternate protein names: Butirosin Biosynthesis Protein BtrG; AIG2-Like Family
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTRRRAGSMARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGSGRDLVWGD VYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA
Sequences:
>Translated_152_residues MTRRRAGSMARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGSGRDLVWGD VYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA >Mature_151_residues TRRRAGSMARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGSGRDLVWGDV YAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16840; Mature: 16708
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRAGSMARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLY CCCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH DFGNYPGMVAGSGRDLVWGDVYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRY CCCCCCCEEECCCCCEEECCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCEEE DCLYYPVGAHAIADKPRIESGDWVQYRRARTA EEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure TRRRAGSMARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLY CCCCCCCHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH DFGNYPGMVAGSGRDLVWGDVYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRY CCCCCCCEEECCCCCEEECCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCEEE DCLYYPVGAHAIADKPRIESGDWVQYRRARTA EEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA