| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yffB [H]
Identifier: 237812821
GI number: 237812821
Start: 2512147
End: 2512521
Strand: Direct
Name: yffB [H]
Synonym: GBP346_A2575
Alternate gene names: 237812821
Gene position: 2512147-2512521 (Clockwise)
Preceding gene: 237812820
Following gene: 237812822
Centisome position: 61.29
GC content: 69.6
Gene sequence:
>375_bases ATGGCGGGCGCGAAAGCCGCGGCCGGCACCGTCGTCTACGGAATCCCGAACTGCGACACCGTGAAGAAGGCCCGCACGTG GCTCGAATCGCACGGCGTCGAGTTCGCGTTCCACGATTTCAAGAAAGCGGGCGTGAGCGCGCCGCTCGTCAAGGGCTGGC TCGCGGACGTGCCGCTCGACGCGCTCGTCAACCGGCGCGGCACGACGTGGCGCGCGCTCACCGACGAACAGAAGGCCGCG GCCGAATCCGAGGCGGGCGCGATCGCGCTGATGATCGACAAGCCCTCGGTGATCAAGCGGCCCGTCGTCGTCGTCGACGG CCGCGTGAAGGCGCTCGGCTTCTCGGCCGACGAGTACGCGGGGCTCTTCGCCTGA
Upstream 100 bases:
>100_bases AGGACGGCACGCACAGCCTGTACTGCGCGGTGATCGTGAAGAAGGTCGACGCGAAGACCCGCGCGAAGGTCGGCCTGAAC GAACTGCTGCGAGGCGACTG
Downstream 100 bases:
>100_bases GCGCCGCGCGCCGCCGCCCCCAACCTGCTGCCGGCCGTCGCGCCGGCATTTTTTATCGAAAGTGGTCCGAAACATGTCCG CCACCCTTGCCCTCACCGAA
Product: ArsC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAA AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA
Sequences:
>Translated_124_residues MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAA AESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA >Mature_123_residues AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLDALVNRRGTTWRALTDEQKAAA ESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYAGLFA
Specific function: Unknown
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family [H]
Homologues:
Organism=Escherichia coli, GI1788815, Length=113, Percent_Identity=41.5929203539823, Blast_Score=110, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 13127; Mature: 12996
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLD CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHCCCHH ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA HHHCCCCCEEEEECCHHHHHCCCCCCEEEEEECCCCHHHCCEEEECCCEEEECCCCHHCC GLFA CCCC >Mature Secondary Structure AGAKAAAGTVVYGIPNCDTVKKARTWLESHGVEFAFHDFKKAGVSAPLVKGWLADVPLD CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCCHHHHHHHCCCHH ALVNRRGTTWRALTDEQKAAAESEAGAIALMIDKPSVIKRPVVVVDGRVKALGFSADEYA HHHCCCCCEEEEECCHHHHHCCCCCCEEEEEECCCCHHHCCEEEECCCEEEECCCCHHCC GLFA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1644752; 9205837; 9278503; 10493123 [H]