| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is hyuE [H]
Identifier: 237812748
GI number: 237812748
Start: 2440135
End: 2441091
Strand: Reverse
Name: hyuE [H]
Synonym: GBP346_A2501
Alternate gene names: 237812748
Gene position: 2441091-2440135 (Counterclockwise)
Preceding gene: 237812749
Following gene: 237812747
Centisome position: 59.56
GC content: 71.79
Gene sequence:
>957_bases ATGAAAATAAAGCTGATCAATCCGAACACGACGCGGCGGATGACCGACGCGATGGGCCGTTGCGCGCGCGAGGTCGCGTC GGCGGGCACGGCGATCGTCGCCGTGAGCCCGGCGATGGGGCCGCCGTCGATCGAAGGCTATTACGACGAGGCGCTCGCGA CGCCCGGCCTGCTCGCCGAAGTCGCGGCGGGCGAGCGCGACGGCTTCGACGGCTACGTGATCGCGTGCTTCGGCGATCCG GGGTTGTATGCGGCGCGCGAACTCGCGCGCGGGCCCGTGATCGGCATCGCGGAGGCGGCGATGCATGCGGCGAGCGTGCT CGCGCCGGGCTTTTCCGTCGTGACGACGCTCGCGCGCACCTGCGCGATGGCGTGGCATCTCGCCGAGCGTTACGGGATGA AGCGGTTCTGCCGCAACGTGCGCGCGACCGACGTCGCGGTGCTCGATCTCGACCGGCCCGGCTCCGCGGCACGGCGCGTG ATCGTCGACGAATGCCGGCGCGCGCTGGACGAGGACGGCGCGGACGCGATCGTGCTCGGCTGCGCGGGCATGGCCGAGTT CGCGCACGAGATCGAGGCGGCGATCGGCGCGCCCGTCGTCGAGGGCGTGACGGCCGCGGTCAAATGGACGGAGGCGCTGA TCGCGCTGAAGCTCGCGACCGCGAAGCGCGGCGATTTCGCGCGGCCGCTCGCGAAGCGCTACGACGGCGAGTTCGCGCGC TTTAGCCCGGACGGCGCGTTCGCGCGCGAGGTCGCGGCGGCGGGTGCCGCCGGTGCCTCAGCAGCCTCAGCAGCCTCAGC GGCCCCAGCAGTCTCAGCAGTCTCAGCAGTCTCAGCAGTCTCAGCGGTCCCAGCGGTCCCAGCGACTTCAACGACTTCGG CGGCGGGATCGGACGCCGCGCCGCCCGCCGCGCCGGCCACCGGCGTTTTTCCGCAAGCGCACATACATTCCGTCTGA
Upstream 100 bases:
>100_bases GCGCCCGCGCTGTCCGGGCTCGCGAATTTCTCGTGGTTCATCGGCGCGGCGCTCGGCGGCGCGTTCTATCGCGCGCTCGC GAAAGCATGACGGAGTCCCC
Downstream 100 bases:
>100_bases CATGCACTATCCGTGTGCCCGTATGGGCGCTCAGGGGTGTTTTCGCTACACTGGGCCATCCGTCGCATCGGCCGCGCGGC CCCGGTTTCCGGGCTTCGCG
Product: hydantoin racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREVAAAGAAGASAASAASAAPAVSAVSAVSAVSAVPAVPATSTTSAAGSDAAPPAAPATGVFPQAHIHSV
Sequences:
>Translated_318_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREVAAAGAAGASAASAASAAPAVSAVSAVSAVSAVPAVPATSTTSAAGSDAAPPAAPATGVFPQAHIHSV >Mature_318_residues MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAEVAAGERDGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLARTCAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRV IVDECRRALDEDGADAIVLGCAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR FSPDGAFAREVAAAGAAGASAASAASAAPAVSAVSAVSAVSAVPAVPATSTTSAAGSDAAPPAAPATGVFPQAHIHSV
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 32250; Mature: 32250
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAE CEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHH VAAGERDGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRVIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE FSPDGAFAREVAAAGAAGASAASAASAAPAVSAVSAVSAVSAVPAVPATSTTSAAGSDAA ECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAAPATGVFPQAHIHSV CCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKIKLINPNTTRRMTDAMGRCAREVASAGTAIVAVSPAMGPPSIEGYYDEALATPGLLAE CEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHH VAAGERDGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLART HHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CAMAWHLAERYGMKRFCRNVRATDVAVLDLDRPGSAARRVIVDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAEFAHEIEAAIGAPVVEGVTAAVKWTEALIALKLATAKRGDFARPLAKRYDGEFAR CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE FSPDGAFAREVAAAGAAGASAASAASAAPAVSAVSAVSAVSAVPAVPATSTTSAAGSDAA ECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPAAPATGVFPQAHIHSV CCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]