| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is pucI [H]
Identifier: 237812749
GI number: 237812749
Start: 2441102
End: 2442592
Strand: Reverse
Name: pucI [H]
Synonym: GBP346_A2502
Alternate gene names: 237812749
Gene position: 2442592-2441102 (Counterclockwise)
Preceding gene: 237812751
Following gene: 237812748
Centisome position: 59.6
GC content: 65.19
Gene sequence:
>1491_bases ATGGCTCAGTTCAGTGTGGCGCGGCAAAGCGCCTCGTATCGGCCGAACGAGGATCGCGCCGGCGGCCCGGATGGCGGCGC TCAGATGCCCGCCGGCTACAGCAGTCGTCTGTACAACGAAGATCTCGCGCCGCTCGCGAGCCAGCGCTGGGGCGCATACA ACATCTTCGCGTTCTGGATGTCGGACGTGCACAGCGTCGGCGGCTACGTGTTTGCGGGCAGCCTGTTCGCGCTCGGTCTG ACGAGCTGGCAGGTGCTCGTCGCGCTGATCGTCGGCATTTCGATCGTCAACGTGCTGTGCAACCTGATCGCGAGGCCGAG CCAGCAGCTAGGCGTGCCGTATCCGGTGGCATGCCGCGCGACGTTCGGCGTGCTCGGCGCGAACGTGCCCGCGGTGATCC GCGGCCTCATCGCGATCGCATGGTACGGCATCCAAACTTATCTGGCGTCGAGCGCGCTCGCGATCGTCGTGCTCAAGTTC TTTCCGCACTGGATGCCGTACGCGGACGTGCATCGCTACGGCTTTCTCGGGCTGTCGGCGCTCGGCTGGGCGGGCTTCAT GCTGCTGTGGGTGCTGCAGGCGTTCGTGTTCTGGAACGGCATGGAGACGATCAAGAAGTTCATCGATTTCGCCGGCCCCG CCGTCTACGTGGTGATGTTCGCCCTCGCGGGCTACATGGTATGGCGCGCGGGCTGGCGCAATATCGGCCTGAATCTCGGC GGCGTCCGGTATCACGGCGCCGAAGTGATTCCGGTGATGGTGACGGCGATCTCGCTCGTCGTGTCGTATTTCTCGGGGCC GATGCTCAACTTCGGCGATTTCTCGCGTTATTGCAGCAGCTACGGCGGCGTGAAGCGCGGCAATTTCTGGGGGCTGCCCG TCAATTTCCTCGCGTTCTCGCTCGTCACCGTGATCACGACGGCCGCGACGCTGCCGGTGTTCGGAGAACTGATCACCGAT CCCGTCGAGACGGTCGGGCGCATCGATCATCCGAGCGCCGTGATACTTGGCGCGCTGACCTTCACGATCGCGACGATCGG CATCAACATCGTCGCGAATTTCGTGTCGCCCGCGTTCGATTTCTCGAACGTCGCGCCGCGCCTGATCAGTTGGCGCGCGG GCGGGATGCTCGCGGCGGTCGCATCGGTGTTCATCACGCCGTGGAATCTCTTCAACAATCCCGCGGTGATCCATTACACG CTCGACGTGCTCGGCGGCTTCATCGGGCCGCTGTACGGCGTGCTGATCGTCGATTTCTATCTCGTGAAGCGCGGCGCGCT GCGGCGCGACGATCTGTACACGACGTCGGCCGACGGCGCGTACTGGTATCGCGACGGCGTGAACCGGCGCGCGATCGCCG CGCTGTTGCCCGCGGCCGCGATCGCCGTCGCATGCGTGATGGCGCCCGCGCTGTCCGGGCTCGCGAATTTCTCGTGGTTC ATCGGCGCGGCGCTCGGCGGCGCGTTCTATCGCGCGCTCGCGAAAGCATGA
Upstream 100 bases:
>100_bases CGTGTGCGGACGCCTCGCCAGGGCGGCATCGGGCGATCCCGTTCGAGCCGCGATTTCAATGACGATCGCGCGGCTCGTCC GCGGCAGGCAAGGAGATGTC
Downstream 100 bases:
>100_bases CGGAGTCCCCATGAAAATAAAGCTGATCAATCCGAACACGACGCGGCGGATGACCGACGCGATGGGCCGTTGCGCGCGCG AGGTCGCGTCGGCGGGCACG
Product: NCS1 nucleoside transporter family protein
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSVGGYVFAGSLFALGL TSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALAIVVLKF FPHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMVWRAGWRNIGLNLG GVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITD PVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYT LDVLGGFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVMAPALSGLANFSWF IGAALGGAFYRALAKA
Sequences:
>Translated_496_residues MAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSVGGYVFAGSLFALGL TSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALAIVVLKF FPHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMVWRAGWRNIGLNLG GVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITD PVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYT LDVLGGFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVMAPALSGLANFSWF IGAALGGAFYRALAKA >Mature_495_residues AQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWMSDVHSVGGYVFAGSLFALGLT SWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRATFGVLGANVPAVIRGLIAIAWYGIQTYLASSALAIVVLKFF PHWMPYADVHRYGFLGLSALGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMVWRAGWRNIGLNLGG VRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFSLVTVITTAATLPVFGELITDP VETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFDFSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTL DVLGGFIGPLYGVLIVDFYLVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVMAPALSGLANFSWFI GAALGGAFYRALAKA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=471, Percent_Identity=28.8747346072187, Blast_Score=190, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319495, Length=485, Percent_Identity=25.5670103092783, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6322219, Length=455, Percent_Identity=23.956043956044, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6319429, Length=472, Percent_Identity=22.8813559322034, Blast_Score=123, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323266, Length=472, Percent_Identity=23.0932203389831, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324766, Length=472, Percent_Identity=22.2457627118644, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6324645, Length=468, Percent_Identity=20.9401709401709, Blast_Score=91, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53429; Mature: 53298
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWM CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHH SDVHSVGGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH TFGVLGANVPAVIRGLIAIAWYGIQTYLASSALAIVVLKFFPHWMPYADVHRYGFLGLSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMVWRAGWRNIGLNLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFS CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LVTVITTAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGGFIGPLYGVLIVDFY HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVMAPALSGLANFSWF HHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGAALGGAFYRALAKA HHHHHHHHHHHHHHCC >Mature Secondary Structure AQFSVARQSASYRPNEDRAGGPDGGAQMPAGYSSRLYNEDLAPLASQRWGAYNIFAFWM CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCHHHHHHHH SDVHSVGGYVFAGSLFALGLTSWQVLVALIVGISIVNVLCNLIARPSQQLGVPYPVACRA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHH TFGVLGANVPAVIRGLIAIAWYGIQTYLASSALAIVVLKFFPHWMPYADVHRYGFLGLSA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LGWAGFMLLWVLQAFVFWNGMETIKKFIDFAGPAVYVVMFALAGYMVWRAGWRNIGLNLG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC GVRYHGAEVIPVMVTAISLVVSYFSGPMLNFGDFSRYCSSYGGVKRGNFWGLPVNFLAFS CEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LVTVITTAATLPVFGELITDPVETVGRIDHPSAVILGALTFTIATIGINIVANFVSPAFD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FSNVAPRLISWRAGGMLAAVASVFITPWNLFNNPAVIHYTLDVLGGFIGPLYGVLIVDFY HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LVKRGALRRDDLYTTSADGAYWYRDGVNRRAIAALLPAAAIAVACVMAPALSGLANFSWF HHHCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGAALGGAFYRALAKA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]