| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812723
Identifier: 237812723
GI number: 237812723
Start: 2421341
End: 2421796
Strand: Direct
Name: 237812723
Synonym: GBP346_A2476
Alternate gene names: NA
Gene position: 2421341-2421796 (Clockwise)
Preceding gene: 237812721
Following gene: 237812727
Centisome position: 59.08
GC content: 72.37
Gene sequence:
>456_bases ATGCGAGCTTCTCATGCGACACGGATCGGCTGCAGCCTCGCGCTGAGCGTGGCCGTCGCCGCGCTGCTGCCGGGCTGCGC GACGTCGCCCCAGCCAGCCTCGGGCGATGCACGCTGCACGCAGGCGGGCGGCACGCGCGAACTGCAGGCGGACCTGCTGT TCGGCCGCGACGTCGCCGGCCGCGGCCCCATCACCGATGCGCAGCGCGCGCGCTTCGTCGCCGACGCGGTCACGCCGCGC TTTCCCGACGGGCTCACGACATGGGACACGCGCGGCCAATGGCGCGATCGCGAAACGGGCCGCATCGTGCGCGAGGAAAG CTTCGTGATCCGTATCGTCGCGCCCGATTCGCCCGCGACGCTCGACAGCCTCGCCGCCATCCGCCGCGCGTACGCCGAGC GGTTCCATCAGCAATCGGTCGGACTCGTGCTGGCGCGCGTTTGCGCGTCGTTCTGA
Upstream 100 bases:
>100_bases TGCCGCGGCGCTCACGCATGCGGCGGCGCGATGCGCGCCGATCGCCCGGCGCGCTTGCCCGGCTAATCGAATCGACCGCG ATCAATCATGAGGATCGACG
Downstream 100 bases:
>100_bases ACGGATCGTGCTGAACGGATCACGCGGACGCCATCGTCGCGATCACGCCGCGGGATTCGCGCGCACAACGCGCCAAACGC ACGACGCAGCCCGACGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRASHATRIGCSLALSVAVAALLPGCATSPQPASGDARCTQAGGTRELQADLLFGRDVAGRGPITDAQRARFVADAVTPR FPDGLTTWDTRGQWRDRETGRIVREESFVIRIVAPDSPATLDSLAAIRRAYAERFHQQSVGLVLARVCASF
Sequences:
>Translated_151_residues MRASHATRIGCSLALSVAVAALLPGCATSPQPASGDARCTQAGGTRELQADLLFGRDVAGRGPITDAQRARFVADAVTPR FPDGLTTWDTRGQWRDRETGRIVREESFVIRIVAPDSPATLDSLAAIRRAYAERFHQQSVGLVLARVCASF >Mature_151_residues MRASHATRIGCSLALSVAVAALLPGCATSPQPASGDARCTQAGGTRELQADLLFGRDVAGRGPITDAQRARFVADAVTPR FPDGLTTWDTRGQWRDRETGRIVREESFVIRIVAPDSPATLDSLAAIRRAYAERFHQQSVGLVLARVCASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16194; Mature: 16194
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASHATRIGCSLALSVAVAALLPGCATSPQPASGDARCTQAGGTRELQADLLFGRDVAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCC RGPITDAQRARFVADAVTPRFPDGLTTWDTRGQWRDRETGRIVREESFVIRIVAPDSPAT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCH LDSLAAIRRAYAERFHQQSVGLVLARVCASF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRASHATRIGCSLALSVAVAALLPGCATSPQPASGDARCTQAGGTRELQADLLFGRDVAG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCC RGPITDAQRARFVADAVTPRFPDGLTTWDTRGQWRDRETGRIVREESFVIRIVAPDSPAT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCH LDSLAAIRRAYAERFHQQSVGLVLARVCASF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA